Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   GD578_RS17000 Genome accession   NZ_CP045560
Coordinates   3513753..3515798 (+) Length   681 a.a.
NCBI ID   WP_002049720.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain AC1530     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3508753..3520798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GD578_RS16985 (GD578_17200) plsB 3509235..3511808 (+) 2574 WP_002049695.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -
  GD578_RS16990 (GD578_17205) adeT2 3511851..3512837 (-) 987 WP_025467798.1 putative multidrug efflux protein AdeT2 -
  GD578_RS16995 (GD578_17210) - 3512917..3513732 (-) 816 WP_002049691.1 NAD-dependent epimerase/dehydratase family protein -
  GD578_RS17000 (GD578_17215) recG 3513753..3515798 (+) 2046 WP_002049720.1 ATP-dependent DNA helicase RecG Machinery gene
  GD578_RS17005 (GD578_17220) comF 3515791..3516426 (+) 636 WP_153518698.1 ComF family protein Machinery gene
  GD578_RS17010 (GD578_17225) - 3516429..3516830 (-) 402 WP_002049701.1 NUDIX domain-containing protein -
  GD578_RS17015 (GD578_17230) - 3516845..3517426 (-) 582 WP_002049746.1 TIGR00730 family Rossman fold protein -
  GD578_RS17020 (GD578_17235) - 3517584..3518597 (+) 1014 WP_002049699.1 CorA family divalent cation transporter -
  GD578_RS17025 (GD578_17240) - 3518671..3518958 (-) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  GD578_RS17030 (GD578_17245) - 3518970..3519611 (-) 642 WP_002049753.1 phospholipid-binding protein MlaC -
  GD578_RS17035 (GD578_17250) - 3519638..3520321 (-) 684 WP_002049738.1 outer membrane lipid asymmetry maintenance protein MlaD -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76435.99 Da        Isoelectric Point: 7.7108

>NTDB_id=345102 GD578_RS17000 WP_002049720.1 3513753..3515798(+) (recG) [Acinetobacter nosocomialis strain AC1530]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQPKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILSDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEALGITVAWLSGKQKGKARTQAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLNRIATNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQSVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=345102 GD578_RS17000 WP_002049720.1 3513753..3515798(+) (recG) [Acinetobacter nosocomialis strain AC1530]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTACTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGACTTGAGCTTTATCATCCAGAAATTCAGCTCATTAATGAGCATACGC
CTCTACCCAAAACGCAGCTCACGGCAATTTACCCAAGTACTGATGGTTTAACGCAACCTAAGTTACGTGAATATGTTAAA
CAGGCGTTGAAGCATCATAGTGATGCTCTACCTGAGCTGCTTCCTAAACAATATACAAATGGATACGCACTCAAAGAAGC
CCTACATTACATTCATGAGCCACCTGTCGATGCCAATATGATTCAATTGGCCCAAGGGTCTCATCCTGCTCAGCAACGCC
TTATTTTTGAAGAGTTGGTCGCACATCAAATTAGCCTTCTCACGCGACGTGCTTATATTCGTCAAATTGCCTCACCTGCT
TTTCCGAGTAGTAAAGTACTTGCAAAAAAACTGTTAGAAGCTCTTCCCTTTCAAATGACCAACGCACAAAAGCGTGTATC
AAAAGAAATTTTAAGCGACTTAAAACAACACCAACCGATGTTACGCTTGGTACAAGGTGATGTAGGTGCAGGTAAAACTT
TAGTTGCGGCAGTTGCGGCATGTCACGCCTTAGAAGCAGATTGGCAAGTTGCCTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAGCGCTGGTTTGAAGCTTTAGGTATTACAGTAGCTTGGCTGTCAGGCAAACAAAAAGG
TAAAGCACGAACACAAGCTGAACAACAAATCAAAGAGGGCCATGCCGAGCTTATTGTAGGTACGCATGCTTTGTTTCAAG
ATAATGTTGAGTTTGCCAAATTAGGACTCGTGATTATTGATGAGCAGCACCGCTTTGGGGTGGATCAACGATTAGCCTTA
CGCAACAAAGGCGCAGAACAACTCACACCACATCAACTCGTCATGACTGCAACGCCAATTCCTAGAACATTAGCAATGAG
TGCTTATGGCGATTTGGATACATCGATTATTGATGAATTGCCGCCAGGCCGAACTCCAATTCAGACCGTCACAATTCCGC
TAGATCGTCGTGAAGAAGTGCTAAATCGAATTGCTACAAATTGCCGAGAAGGTAAACAAGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCTGCCGAAGCCACTTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCTGATGAAAAGCAATCTGTCATGCAAGCATTTAAAAACAACGAACTACAGC
TCTTAATTGCGACAACTGTTATTGAAGTTGGGGTAGATGTACCTAATGCCTCTATTATGGTCATTGAAAATGCTGAACGA
CTAGGACTTTCACAGCTACACCAATTACGAGGTCGAGTCGGACGAGGTGCAAAGGCTAGTTTTTGTGTTCTTCTCTATAA
ACCTCCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAACGACGGCTTTGTCATTGCTGAAAAAG
ACCTTGAATTACGAGGTCCGGGTGAGTTATTAGGAACAAAACAGACAGGTGATATGGGCTTCCGTGTCGCACGTTTAGAA
CGAGATGATCATTTACTGAGTCAAGCGCATTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGACGCCCT
CTTGAAACGCTGGCTGCCTGAAGCACCTCGATACGCTTATGTTTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

DEAD/DEAH box helicase (DEAD)

(261-422)

RecG wedge domain (RecG_wedge)

(7-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.353

97.651

0.404
  recG/mmsA Streptococcus pneumoniae R36A

41.353

97.651

0.404
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389