Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | EWA64_RS07215 | Genome accession | NZ_CP035921 |
| Coordinates | 1362266..1362778 (-) | Length | 170 a.a. |
| NCBI ID | WP_039438951.1 | Uniprot ID | A0A151KZI7 |
| Organism | Vibrio cidicii strain 2423-01 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1357266..1367778
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EWA64_RS07200 | aroB | 1358608..1359699 (-) | 1092 | WP_061895833.1 | 3-dehydroquinate synthase | - |
| EWA64_RS07205 | aroK | 1359732..1360250 (-) | 519 | WP_039423021.1 | shikimate kinase AroK | - |
| EWA64_RS07210 | pilQ | 1360460..1362235 (-) | 1776 | WP_061895832.1 | type IV pilus secretin PilQ | Machinery gene |
| EWA64_RS07215 | pilP | 1362266..1362778 (-) | 513 | WP_039438951.1 | pilus assembly protein PilP | Machinery gene |
| EWA64_RS07220 | pilO | 1362768..1363358 (-) | 591 | WP_061895831.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EWA64_RS07225 | pilN | 1363351..1363938 (-) | 588 | WP_061895830.1 | PilN domain-containing protein | Machinery gene |
| EWA64_RS07230 | pilM | 1363922..1364941 (-) | 1020 | WP_061895829.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| EWA64_RS07235 | - | 1365080..1367596 (+) | 2517 | WP_061895828.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18937.91 Da Isoelectric Point: 9.9068
>NTDB_id=344991 EWA64_RS07215 WP_039438951.1 1362266..1362778(-) (pilP) [Vibrio cidicii strain 2423-01]
MKSSWWMFSVVLLLAGCRANSDSLDDFLRQVESQARQEVAKLKPEQEYVATSYASAALRLPFELPKEAVIATQPVVKKEC
WQPAERARSGRLERYPLSQLRLKGIMGSGNSVSGLVQTPQGTVERVLAGQYIGQNNGKVTLITPSYLMINETLPDGLGCW
QQRKVKLALR
MKSSWWMFSVVLLLAGCRANSDSLDDFLRQVESQARQEVAKLKPEQEYVATSYASAALRLPFELPKEAVIATQPVVKKEC
WQPAERARSGRLERYPLSQLRLKGIMGSGNSVSGLVQTPQGTVERVLAGQYIGQNNGKVTLITPSYLMINETLPDGLGCW
QQRKVKLALR
Nucleotide
Download Length: 513 bp
>NTDB_id=344991 EWA64_RS07215 WP_039438951.1 1362266..1362778(-) (pilP) [Vibrio cidicii strain 2423-01]
ATGAAAAGTAGCTGGTGGATGTTCTCGGTTGTATTGCTGTTGGCAGGCTGTCGCGCCAACAGTGACTCTTTGGATGACTT
TTTGCGTCAGGTGGAATCACAGGCTCGCCAAGAGGTCGCCAAGCTCAAACCAGAGCAGGAATATGTCGCGACATCGTACG
CCTCGGCGGCGCTGCGTTTGCCCTTTGAACTGCCCAAAGAAGCGGTGATAGCCACCCAGCCGGTGGTGAAAAAAGAGTGC
TGGCAACCGGCTGAACGCGCCCGCTCCGGACGCCTAGAGCGCTACCCGCTCAGCCAACTGCGTTTAAAAGGCATCATGGG
CAGCGGTAACTCCGTTTCCGGCTTAGTGCAAACCCCGCAAGGAACGGTCGAACGGGTACTCGCGGGGCAATACATTGGGC
AGAACAACGGCAAAGTAACGCTGATTACCCCCTCGTATTTAATGATCAATGAAACCTTACCCGATGGGCTAGGTTGTTGG
CAGCAGCGTAAAGTCAAGCTGGCATTGAGATAG
ATGAAAAGTAGCTGGTGGATGTTCTCGGTTGTATTGCTGTTGGCAGGCTGTCGCGCCAACAGTGACTCTTTGGATGACTT
TTTGCGTCAGGTGGAATCACAGGCTCGCCAAGAGGTCGCCAAGCTCAAACCAGAGCAGGAATATGTCGCGACATCGTACG
CCTCGGCGGCGCTGCGTTTGCCCTTTGAACTGCCCAAAGAAGCGGTGATAGCCACCCAGCCGGTGGTGAAAAAAGAGTGC
TGGCAACCGGCTGAACGCGCCCGCTCCGGACGCCTAGAGCGCTACCCGCTCAGCCAACTGCGTTTAAAAGGCATCATGGG
CAGCGGTAACTCCGTTTCCGGCTTAGTGCAAACCCCGCAAGGAACGGTCGAACGGGTACTCGCGGGGCAATACATTGGGC
AGAACAACGGCAAAGTAACGCTGATTACCCCCTCGTATTTAATGATCAATGAAACCTTACCCGATGGGCTAGGTTGTTGG
CAGCAGCGTAAAGTCAAGCTGGCATTGAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
66.467 |
98.235 |
0.653 |
| pilP | Vibrio cholerae strain A1552 |
60.606 |
97.059 |
0.588 |