Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ELE36_RS16000 Genome accession   NZ_CP035704
Coordinates   3728664..3729020 (-) Length   118 a.a.
NCBI ID   WP_129836945.1    Uniprot ID   A0A411HQF8
Organism   Pseudolysobacter antarcticus strain AQ6-296     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3723664..3734020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELE36_RS15990 (ELE36_15985) - 3725832..3727853 (-) 2022 WP_129835024.1 methyl-accepting chemotaxis protein -
  ELE36_RS15995 (ELE36_15990) - 3727920..3728456 (-) 537 WP_129835026.1 chemotaxis protein CheW -
  ELE36_RS16000 (ELE36_15995) pilG 3728664..3729020 (-) 357 WP_129836945.1 response regulator Regulator
  ELE36_RS16005 (ELE36_16000) gshB 3729464..3730411 (+) 948 WP_129835028.1 glutathione synthase -
  ELE36_RS16010 (ELE36_16005) - 3730408..3731313 (+) 906 WP_242512289.1 energy transducer TonB -
  ELE36_RS16015 (ELE36_16010) - 3731385..3731948 (+) 564 WP_129835030.1 YqgE/AlgH family protein -
  ELE36_RS16020 (ELE36_16015) ruvX 3731970..3732389 (+) 420 WP_129835032.1 Holliday junction resolvase RuvX -
  ELE36_RS16025 (ELE36_16020) - 3732461..3733408 (+) 948 WP_129835034.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 118 a.a.        Molecular weight: 13354.49 Da        Isoelectric Point: 7.8565

>NTDB_id=344003 ELE36_RS16000 WP_129836945.1 3728664..3729020(-) (pilG) [Pseudolysobacter antarcticus strain AQ6-296]
MVIDDSKTIRRTAETLLKKEGCEVVTAVDGFEALAKISDNQPDIIFVDIMMPRLDGYQTCALIKNHQVFRSTPVVMLSSK
DGLFDKARGRIVGSEQYLTKPFTRDELLDAIRRHVINK

Nucleotide


Download         Length: 357 bp        

>NTDB_id=344003 ELE36_RS16000 WP_129836945.1 3728664..3729020(-) (pilG) [Pseudolysobacter antarcticus strain AQ6-296]
ATGGTAATCGATGATTCCAAGACCATACGTCGCACCGCCGAAACATTGTTGAAAAAAGAGGGTTGCGAAGTCGTCACTGC
GGTCGACGGTTTCGAAGCCTTGGCCAAGATTTCGGATAATCAACCCGATATCATCTTCGTCGACATCATGATGCCGCGAC
TGGATGGCTATCAGACCTGCGCGTTGATCAAGAATCATCAGGTATTCCGCTCCACACCGGTGGTGATGTTGTCGAGCAAG
GATGGTCTCTTCGACAAGGCCCGCGGGCGCATTGTCGGTTCCGAGCAATATCTGACCAAACCTTTCACACGTGACGAATT
GCTGGATGCGATCCGGCGACATGTGATCAATAAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A411HQF8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.261

97.458

0.763
  vicR Streptococcus mutans UA159

41.379

98.305

0.407
  micA Streptococcus pneumoniae Cp1015

42.991

90.678

0.39
  pilH Synechocystis sp. PCC 6803

37.607

99.153

0.373

Multiple sequence alignment