Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | F9C43_RS28305 | Genome accession | NZ_CP045002 |
| Coordinates | 6088645..6089268 (-) | Length | 207 a.a. |
| NCBI ID | WP_003103268.1 | Uniprot ID | G3XD51 |
| Organism | Pseudomonas aeruginosa strain PAG5 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6083645..6094268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F9C43_RS28285 (F9C43_28955) | aroB | 6084240..6085346 (-) | 1107 | WP_003116138.1 | 3-dehydroquinate synthase | - |
| F9C43_RS28290 (F9C43_28960) | aroK | 6085396..6085914 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| F9C43_RS28295 (F9C43_28965) | pilQ | 6085926..6088070 (-) | 2145 | WP_003146401.1 | type 4a pilus secretin PilQ | Machinery gene |
| F9C43_RS28300 (F9C43_28970) | comL/pilP | 6088124..6088648 (-) | 525 | WP_003095836.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| F9C43_RS28305 (F9C43_28975) | pilO | 6088645..6089268 (-) | 624 | WP_003103268.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| F9C43_RS28310 (F9C43_28980) | pilN | 6089265..6089861 (-) | 597 | WP_031671448.1 | type 4a pilus biogenesis protein PilN | Machinery gene |
| F9C43_RS28315 (F9C43_28985) | pilM | 6089861..6090917 (-) | 1057 | Protein_5592 | type IV pilus assembly protein PilM | - |
| F9C43_RS28320 (F9C43_28990) | - | 6091102..6093573 (+) | 2472 | WP_165567208.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22819.26 Da Isoelectric Point: 4.7787
>NTDB_id=343527 F9C43_RS28305 WP_003103268.1 6088645..6089268(-) (pilO) [Pseudomonas aeruginosa strain PAG5]
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDINDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPVAPGSTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=343527 F9C43_RS28305 WP_003103268.1 6088645..6089268(-) (pilO) [Pseudomonas aeruginosa strain PAG5]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGTGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTTGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTGGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGATATCAACGATCTCGACCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTGAGTGACA
TGCAGGCTCAGCTCGAACAGCAGGCCGCGGAAGAGGAGACGCTCAAGCAGCAGTTCTCCACCAAGGCCTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAAGAGTCCTTTGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGCCTGGGCAGCGGCCTGGAGTTCGAGGAAATCAAGCTGCTTC
CCGAGGTTGCCCAGCAGTTCTACATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTCACCCTGCATGACTTCGAGATCAAGCCGGTCGCGCCCGGCAGCACGTC
CAAGCTGCGCATGAGCATCCTGGCCAAGACCTATCGCTACAACGACAAGGGGCTGAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
46.114 |
93.237 |
0.43 |
| pilO | Acinetobacter baumannii D1279779 |
43.979 |
92.271 |
0.406 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.455 |
92.271 |
0.401 |