Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   FSA28_RS02725 Genome accession   NZ_CP044495
Coordinates   544750..545406 (-) Length   218 a.a.
NCBI ID   WP_002291703.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA140     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 539750..550406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS02700 (FSA28_0322) trpD 540184..541191 (+) 1008 WP_002291711.1 anthranilate phosphoribosyltransferase -
  FSA28_RS02705 (FSA28_0323) trpC 541184..541951 (+) 768 WP_002291709.1 indole-3-glycerol phosphate synthase TrpC -
  FSA28_RS02710 (FSA28_0324) - 541938..542519 (+) 582 WP_002291707.1 phosphoribosylanthranilate isomerase -
  FSA28_RS02715 (FSA28_0325) trpB 542516..543727 (+) 1212 WP_002291705.1 tryptophan synthase subunit beta -
  FSA28_RS02720 (FSA28_0326) trpA 543731..544513 (+) 783 WP_002264437.1 tryptophan synthase subunit alpha -
  FSA28_RS02725 (FSA28_0327) cclA/cilC 544750..545406 (-) 657 WP_002291703.1 prepilin peptidase Machinery gene
  FSA28_RS02730 (FSA28_0328) dpr 545507..546034 (+) 528 WP_002266317.1 DNA starvation/stationary phase protection protein -
  FSA28_RS02735 (FSA28_0329) - 546241..546447 (+) 207 WP_002262060.1 YqgQ family protein -
  FSA28_RS02740 (FSA28_0330) - 546440..547411 (+) 972 WP_002262061.1 ROK family glucokinase -
  FSA28_RS02745 (FSA28_0331) - 547421..547810 (+) 390 WP_002262062.1 rhodanese-like domain-containing protein -
  FSA28_RS02755 (FSA28_0332) typA 548044..549888 (+) 1845 WP_002262063.1 translational GTPase TypA -
  FSA28_RS02760 (FSA28_0333) - 549917..550171 (+) 255 WP_002262064.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 24825.08 Da        Isoelectric Point: 8.4751

>NTDB_id=342994 FSA28_RS02725 WP_002291703.1 544750..545406(-) (cclA/cilC) [Streptococcus mutans strain UA140]
MKLILFFMLGASLGSFFGLVVDRYPQKSIIFPRSHCNKCYNCLTMRDLIPIFSRIINKNSCRFCGYPIPLRYSLVELLCG
LISTGFALDLLTTSQVCLLFMGVLLSLYDLQDQSYPLTLWIGFTFLLMFIYPLNLISLILFLFGIFAALKNINIGSGDFL
YLATLALSLNLQQIIWIIQIASLLGILCSLLFQKYKEPFAFVPFLFLGHLIIIFSHLI

Nucleotide


Download         Length: 657 bp        

>NTDB_id=342994 FSA28_RS02725 WP_002291703.1 544750..545406(-) (cclA/cilC) [Streptococcus mutans strain UA140]
ATGAAACTTATTTTATTTTTTATGTTGGGAGCTTCTCTTGGCTCTTTCTTTGGCTTAGTTGTTGATCGTTACCCTCAGAA
ATCTATTATATTTCCTAGAAGCCATTGCAATAAGTGTTATAACTGCTTAACCATGAGGGATCTTATCCCAATATTTTCAC
GAATCATCAACAAAAATTCTTGTCGCTTTTGCGGTTACCCTATTCCATTGCGTTATTCCTTGGTAGAATTACTCTGCGGA
CTGATTAGCACAGGTTTTGCTCTTGATTTATTAACCACTTCACAAGTATGTTTGCTCTTCATGGGAGTTCTTTTATCTCT
TTATGATTTACAAGATCAGTCTTATCCTTTGACACTGTGGATAGGCTTTACTTTTCTCTTAATGTTTATCTATCCTCTTA
ACCTAATTAGCTTGATTCTTTTTCTATTTGGTATTTTTGCTGCCCTCAAAAATATTAATATCGGAAGCGGTGATTTCCTC
TATCTGGCTACTTTGGCACTTTCTCTTAATCTTCAGCAAATTATTTGGATTATTCAGATTGCCAGTTTATTAGGAATTCT
TTGCAGCCTGCTTTTTCAAAAGTACAAAGAACCTTTTGCTTTTGTTCCTTTCTTATTCTTGGGTCACCTCATTATCATTT
TCTCTCACTTGATTTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-87)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

43.256

98.624

0.427
  cclA/cilC Streptococcus mitis NCTC 12261

42.326

98.624

0.417
  cclA/cilC Streptococcus pneumoniae Rx1

42.723

97.706

0.417
  cclA/cilC Streptococcus pneumoniae D39

42.723

97.706

0.417
  cclA/cilC Streptococcus pneumoniae R6

42.723

97.706

0.417
  cclA/cilC Streptococcus pneumoniae TIGR4

41.784

97.706

0.408