Detailed information NTG0342982

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: EU243_RS07000
• Genome accession: NZ_CP035533
• Coordinates: 1377048..1378211 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain DTU001
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1372048..1383211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EU243_RS06980 (EU243_07090)	tuaH	1372465..1373661 (+)	1197	WP_079004918.1	teichuronic acid biosynthesis protein TuaH	-
EU243_RS06985 (EU243_07095)	-	1373794..1374870 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
EU243_RS06990 (EU243_07100)	-	1374960..1376174 (-)	1215	WP_003151383.1	LCP family protein	-
EU243_RS06995 (EU243_07105)	-	1376179..1376826 (-)	648	WP_003151384.1	YigZ family protein	-
EU243_RS07000 (EU243_07110)	degS	1377048..1378211 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
EU243_RS07005 (EU243_07115)	degU	1378288..1378977 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
EU243_RS07010 (EU243_07120)	-	1379075..1379923 (+)	849	WP_044052857.1	DegV family protein	-
EU243_RS07015 (EU243_07125)	comFA	1380031..1381416 (+)	1386	WP_046560106.1	DEAD/DEAH box helicase	Machinery gene
EU243_RS07020 (EU243_07130)	-	1381474..1381758 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
EU243_RS07025 (EU243_07135)	comFC	1381764..1382453 (+)	690	WP_197080391.1	phosphoribosyltransferase family protein	Machinery gene
EU243_RS07030 (EU243_07140)	-	1382527..1382946 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=342982 EU243_RS07000 WP_003151385.1 1377048..1378211(+) (degS) [Bacillus velezensis strain DTU001]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=342982 EU243_RS07000 WP_003151385.1 1377048..1378211(+) (degS) [Bacillus velezensis strain DTU001]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGTTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948