Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   FSA40_RS03095 Genome accession   NZ_CP044493
Coordinates   590868..591806 (+) Length   312 a.a.
NCBI ID   WP_151416210.1    Uniprot ID   -
Organism   Streptococcus mutans strain MD     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 585868..596806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA40_RS03065 (FSA40_0605) - 585976..586476 (+) 501 WP_002261902.1 GNAT family N-acetyltransferase -
  FSA40_RS03070 (FSA40_0606) - 586566..587939 (-) 1374 WP_151416208.1 PLP-dependent aminotransferase family protein -
  FSA40_RS03075 (FSA40_0607) - 588067..589035 (+) 969 WP_151416209.1 zinc-binding dehydrogenase -
  FSA40_RS03080 - 589068..589195 (-) 128 Protein_549 transcriptional regulator -
  FSA40_RS03085 (FSA40_0608) - 589280..589561 (+) 282 WP_002269717.1 hypothetical protein -
  FSA40_RS03090 (FSA40_0609) - 589667..590560 (+) 894 WP_002261898.1 alpha/beta hydrolase -
  FSA40_RS03095 (FSA40_0610) coiA 590868..591806 (+) 939 WP_151416210.1 competence protein CoiA family protein Machinery gene
  FSA40_RS03100 (FSA40_0611) pepF 591828..593627 (+) 1800 WP_151416211.1 oligoendopeptidase F Regulator
  FSA40_RS03105 (FSA40_0612) - 593844..594461 (+) 618 WP_002294974.1 HAD-IA family hydrolase -
  FSA40_RS03110 (FSA40_0613) - 594511..595218 (+) 708 WP_002272060.1 O-methyltransferase -
  FSA40_RS03115 (FSA40_0614) prsA 595280..596281 (+) 1002 WP_002261893.1 peptidylprolyl isomerase PrsA -

Sequence


Protein


Download         Length: 312 a.a.        Molecular weight: 36781.15 Da        Isoelectric Point: 8.7637

>NTDB_id=342892 FSA40_RS03095 WP_151416210.1 590868..591806(+) (coiA) [Streptococcus mutans strain MD]
MLVARDKNGKLINLLNGIPDKSDFYCPACQSPVRLKNGRVMRPHFAHVALQDCKFYSENESAEHLNLKAELYQSLSQTES
VEIEKVIPEPEQIADLLVNHNLALEVQCSRLSEARLCERTQAYQANGYQVLWLLGEKLWLDRRLSNLHKQFLYFSQNMGF
HLWELDINRRELRLKYLIYEDIFGKVYYQTRSCFFDGNIMTFLQLPYAKQTLTSYPVHQRRQVGLAIQKQLLARNPRWLR
QQELAYSQGRNLIAQSDADFFPQVRLPQCSRGFCQINQDVSHFSAAFFQYYQKQKDKEIQTLYPPAFYDKMK

Nucleotide


Download         Length: 939 bp        

>NTDB_id=342892 FSA40_RS03095 WP_151416210.1 590868..591806(+) (coiA) [Streptococcus mutans strain MD]
ATGTTAGTTGCAAGGGATAAAAATGGAAAGTTGATTAATCTTCTGAATGGTATTCCTGACAAAAGTGATTTTTATTGTCC
TGCCTGCCAATCACCTGTACGTCTCAAAAACGGCAGGGTTATGCGTCCGCATTTTGCCCATGTTGCTTTGCAAGACTGCA
AATTTTACAGTGAAAATGAGTCCGCTGAACACCTAAACTTGAAAGCAGAACTCTATCAGTCATTATCTCAGACGGAAAGT
GTTGAGATCGAAAAAGTCATACCAGAACCTGAACAAATCGCAGACTTATTAGTTAATCATAACCTAGCATTAGAAGTTCA
GTGTTCTCGCTTGTCCGAAGCTCGTCTGTGTGAGCGAACGCAGGCCTATCAGGCCAATGGTTATCAGGTACTGTGGCTGC
TTGGGGAGAAACTCTGGTTGGATAGGCGTTTATCCAACTTGCACAAACAATTTCTTTACTTTTCACAAAATATGGGCTTT
CATCTTTGGGAATTAGATATTAATAGGCGTGAGTTGCGACTTAAGTACTTGATTTATGAAGATATTTTTGGCAAAGTCTA
TTATCAAACGAGGTCTTGTTTTTTTGATGGTAATATCATGACCTTTTTACAATTGCCCTATGCTAAGCAAACCTTGACTT
CTTATCCTGTTCACCAGCGCAGGCAGGTTGGTTTAGCCATTCAAAAACAACTGCTAGCACGCAATCCGCGTTGGCTGCGT
CAGCAAGAACTTGCTTATTCACAGGGGCGTAATCTGATAGCACAATCAGATGCTGATTTTTTCCCGCAGGTAAGGTTACC
GCAATGTTCAAGAGGCTTTTGTCAAATCAATCAGGATGTATCTCATTTTAGCGCAGCTTTTTTTCAATATTATCAAAAGC
AAAAAGACAAAGAAATTCAAACACTGTATCCGCCAGCCTTTTATGATAAAATGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

47.249

99.038

0.468

  coiA Streptococcus pneumoniae Rx1

45.955

99.038

0.455

  coiA Streptococcus pneumoniae D39

45.955

99.038

0.455

  coiA Streptococcus pneumoniae R6

45.955

99.038

0.455

  coiA Streptococcus pneumoniae TIGR4

45.631

99.038

0.452

  coiA Lactococcus lactis subsp. cremoris KW2

39.692

100

0.413