Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   FSA31_RS03085 Genome accession   NZ_CP044492
Coordinates   622052..622990 (+) Length   312 a.a.
NCBI ID   WP_002275542.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 617052..627990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS03060 (FSA31_0606) - 618291..619259 (+) 969 WP_002261900.1 zinc-binding dehydrogenase -
  FSA31_RS03065 - 619292..619419 (-) 128 Protein_551 transcriptional regulator -
  FSA31_RS03070 (FSA31_0607) - 619504..619785 (+) 282 WP_002261899.1 hypothetical protein -
  FSA31_RS03075 (FSA31_0608) - 619891..620784 (+) 894 WP_002267117.1 alpha/beta hydrolase -
  FSA31_RS03080 (FSA31_0609) - 620824..621717 (-) 894 WP_076611617.1 IS982-like element ISSmu5 family transposase -
  FSA31_RS03085 (FSA31_0610) coiA 622052..622990 (+) 939 WP_002275542.1 competence protein CoiA family protein Machinery gene
  FSA31_RS03090 (FSA31_0611) pepF 623012..624811 (+) 1800 WP_002284841.1 oligoendopeptidase F Regulator
  FSA31_RS03095 (FSA31_0612) - 625027..625644 (+) 618 WP_002275807.1 HAD-IA family hydrolase -
  FSA31_RS03100 (FSA31_0613) - 625694..626401 (+) 708 WP_002275166.1 O-methyltransferase -
  FSA31_RS03105 (FSA31_0614) prsA 626463..627464 (+) 1002 WP_002284840.1 peptidylprolyl isomerase PrsA -

Sequence

Protein


Download         Length: 312 a.a.        Molecular weight: 36694.02 Da        Isoelectric Point: 8.7637

>NTDB_id=342776 FSA31_RS03085 WP_002275542.1 622052..622990(+) (coiA) [Streptococcus mutans strain T8]
MLAARDKNGKLINLLNGIPDKSDFYCPACQSPVRLKNGRVMRPHFAHVALQDCKFYSENESAEHLNLKAELYQSLSQTES
VEIEKVIPEPEQIADLLVNHNLALEVQCSRLSEARLCERTQAYQVNGYQVLWLLGEKLWLDRRLSSLHKQFLYFSQNMGF
HLWELDINRRELRLKYLIYEDIFGKVYYQTRSCSFDGNIMTFLQLPYAKQTLTSYPVHQRRQVGLAIQKQLLARNPRWLR
QQELAYSQGRNLIAQSDADFFPQVRLPQCSRGFCQINQDVSHFSAAFFQYYQKQKDKEIQTLYPPAFYDKMK

Nucleotide


Download         Length: 939 bp        

>NTDB_id=342776 FSA31_RS03085 WP_002275542.1 622052..622990(+) (coiA) [Streptococcus mutans strain T8]
ATGTTAGCTGCAAGGGATAAAAATGGAAAGTTGATTAATCTTCTGAATGGTATTCCTGACAAAAGTGATTTTTATTGTCC
TGCCTGCCAATCGCCTGTACGTCTCAAAAACGGCAGGGTTATGCGTCCGCATTTTGCCCATGTTGCTTTGCAAGACTGCA
AATTTTACAGTGAAAATGAGTCCGCTGAACACCTAAACTTGAAAGCAGAACTCTATCAGTCATTATCTCAGACGGAAAGT
GTTGAGATCGAAAAAGTCATACCAGAACCTGAACAAATCGCAGACTTATTAGTTAATCATAACCTAGCATTAGAAGTTCA
GTGTTCTCGCTTGTCCGAAGCTCGTCTGTGTGAACGAACGCAGGCCTATCAGGTCAATGGTTATCAGGTACTGTGGCTGC
TTGGGGAGAAACTCTGGTTGGATAGGCGTTTATCCAGCTTGCACAAACAATTTCTTTACTTTTCACAAAATATGGGCTTT
CATCTTTGGGAATTAGATATTAATAGGCGTGAGTTGCGACTTAAGTACTTGATTTATGAAGATATTTTTGGCAAAGTCTA
TTATCAAACGAGGTCTTGTTCTTTTGATGGTAATATCATGACCTTTTTACAATTGCCCTATGCTAAGCAAACCTTGACTT
CTTATCCTGTTCACCAGCGCAGGCAGGTTGGTTTAGCCATTCAAAAACAACTGCTAGCACGCAATCCGCGTTGGCTGCGT
CAGCAAGAACTTGCTTATTCACAGGGGCGTAATCTGATAGCACAATCAGATGCTGATTTTTTCCCGCAGGTAAGGTTACC
GCAATGTTCAAGAGGCTTTTGTCAAATCAATCAGGATGTATCTCATTTTAGCGCAGCTTTTTTTCAATATTATCAAAAGC
AAAAAGACAAAGAAATTCAAACACTGTATCCGCCAGCCTTTTATGATAAAATGAAATAA

Domains

Predicted by InterProScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-263)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

46.926

99.038

0.465
  coiA Streptococcus pneumoniae Rx1

45.955

99.038

0.455
  coiA Streptococcus pneumoniae D39

45.955

99.038

0.455
  coiA Streptococcus pneumoniae R6

45.955

99.038

0.455
  coiA Streptococcus pneumoniae TIGR4

45.631

99.038

0.452
  coiA Lactococcus lactis subsp. cremoris KW2

39.385

100

0.41