Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   FSA31_RS02605 Genome accession   NZ_CP044492
Coordinates   525078..525734 (-) Length   218 a.a.
NCBI ID   WP_002284954.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 520078..530734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS02580 (FSA31_0511) trpD 520512..521519 (+) 1008 WP_002262053.1 anthranilate phosphoribosyltransferase -
  FSA31_RS02585 (FSA31_0512) trpC 521512..522279 (+) 768 WP_002267346.1 indole-3-glycerol phosphate synthase TrpC -
  FSA31_RS02590 (FSA31_0513) - 522266..522847 (+) 582 WP_002284951.1 phosphoribosylanthranilate isomerase -
  FSA31_RS02595 (FSA31_0514) trpB 522844..524055 (+) 1212 WP_002284952.1 tryptophan synthase subunit beta -
  FSA31_RS02600 (FSA31_0515) trpA 524059..524841 (+) 783 WP_002284953.1 tryptophan synthase subunit alpha -
  FSA31_RS02605 (FSA31_0516) cclA/cilC 525078..525734 (-) 657 WP_002284954.1 A24 family peptidase Machinery gene
  FSA31_RS02610 (FSA31_0517) dpr 525835..526362 (+) 528 WP_002266317.1 DNA starvation/stationary phase protection protein -
  FSA31_RS02615 (FSA31_0518) - 526570..526776 (+) 207 WP_002262060.1 YqgQ family protein -
  FSA31_RS02620 (FSA31_0519) - 526769..527740 (+) 972 WP_002268147.1 ROK family glucokinase -
  FSA31_RS02625 (FSA31_0520) - 527750..528139 (+) 390 WP_002262062.1 rhodanese-like domain-containing protein -
  FSA31_RS02635 (FSA31_0522) typA 528372..530216 (+) 1845 WP_002262063.1 translational GTPase TypA -
  FSA31_RS02640 (FSA31_0523) - 530245..530499 (+) 255 WP_002262064.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 24945.16 Da        Isoelectric Point: 8.6827

>NTDB_id=342769 FSA31_RS02605 WP_002284954.1 525078..525734(-) (cclA/cilC) [Streptococcus mutans strain T8]
MKLILFFMLGASLGSFFGLVVDRYPQKSIIFPRSHCNKCYNCLTMRDLIPIFSRIINKNSCRFCGYPIPLRYSLVELLCG
LISTGFALDLLTTSQVYLLFMGVLLSLYDLQDQSYPLTLWIGFTFLLMFIYPLNLISLILFLFGIFAALKNINIGSGDFL
YLATLALSLNLQQIIWIIQIASLLGILYSLLFQKYKEPFAFVPFLFLGHLIIIFSHLI

Nucleotide


Download         Length: 657 bp        

>NTDB_id=342769 FSA31_RS02605 WP_002284954.1 525078..525734(-) (cclA/cilC) [Streptococcus mutans strain T8]
ATGAAACTTATTTTATTTTTTATGTTGGGAGCTTCTCTTGGCTCTTTCTTTGGCTTAGTTGTTGATCGTTACCCTCAGAA
ATCTATTATATTTCCTAGAAGCCATTGCAATAAGTGTTATAACTGCTTAACCATGAGGGATCTTATCCCAATATTTTCAC
GAATCATCAACAAAAATTCTTGTCGCTTTTGCGGTTACCCTATTCCATTGCGTTATTCCTTGGTAGAATTACTCTGCGGA
CTGATTAGCACAGGTTTTGCTCTTGATTTATTAACCACTTCACAAGTATATTTGCTCTTCATGGGAGTTCTTTTATCTCT
TTATGATTTACAAGATCAGTCTTATCCTTTGACACTGTGGATAGGCTTTACTTTTCTCTTAATGTTTATCTATCCTCTTA
ACCTAATTAGCTTAATTCTTTTTCTATTTGGTATTTTTGCTGCCCTCAAAAATATTAATATCGGAAGCGGTGATTTCCTC
TATCTGGCTACTTTGGCACTTTCTCTTAATCTTCAGCAAATTATTTGGATTATTCAGATTGCCAGTTTATTAGGAATTCT
TTACAGCCTGCTTTTTCAAAAGTACAAAGAACCTTTTGCTTTTGTTCCTTTCTTATTCTTGGGTCACCTCATTATCATTT
TCTCTCACTTGATTTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-87)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

43.256

98.624

0.427
  cclA/cilC Streptococcus mitis NCTC 12261

42.326

98.624

0.417
  cclA/cilC Streptococcus pneumoniae Rx1

42.723

97.706

0.417
  cclA/cilC Streptococcus pneumoniae D39

42.723

97.706

0.417
  cclA/cilC Streptococcus pneumoniae R6

42.723

97.706

0.417
  cclA/cilC Streptococcus pneumoniae TIGR4

41.784

97.706

0.408

Multiple sequence alignment