Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ETT45_RS07235 | Genome accession | NZ_CP035454 |
| Coordinates | 1420239..1420730 (-) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain emm54 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1415239..1425730
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT45_RS07220 (ETT45_07215) | - | 1417969..1418913 (+) | 945 | WP_011888617.1 | magnesium transporter CorA family protein | - |
| ETT45_RS07225 (ETT45_07220) | - | 1419046..1419702 (+) | 657 | WP_136129635.1 | DUF1129 domain-containing protein | - |
| ETT45_RS07230 (ETT45_07225) | rpsR | 1419835..1420074 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| ETT45_RS07235 (ETT45_07230) | ssb | 1420239..1420730 (-) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| ETT45_RS07240 (ETT45_07235) | rpsF | 1420752..1421042 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| ETT45_RS07245 (ETT45_07240) | - | 1421215..1421508 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| ETT45_RS07250 (ETT45_07245) | mutY | 1421676..1422830 (+) | 1155 | WP_315940875.1 | A/G-specific adenine glycosylase | - |
| ETT45_RS07255 (ETT45_07250) | - | 1422906..1423511 (+) | 606 | WP_136129634.1 | helix-turn-helix domain-containing protein | - |
| ETT45_RS07260 (ETT45_07255) | trxA | 1423563..1423895 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| ETT45_RS07265 (ETT45_07260) | - | 1423958..1424458 (-) | 501 | WP_002993246.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=342479 ETT45_RS07235 WP_002983122.1 1420239..1420730(-) (ssb) [Streptococcus pyogenes strain emm54]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=342479 ETT45_RS07235 WP_002983122.1 1420239..1420730(-) (ssb) [Streptococcus pyogenes strain emm54]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |