Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BACIH_RS04015 Genome accession   NZ_CP044360
Coordinates   782495..784312 (+) Length   605 a.a.
NCBI ID   WP_012117100.1    Uniprot ID   A7Z2J9
Organism   Bacillus amyloliquefaciens strain V167     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 777495..789312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACIH_RS19950 (BACIH_0797) - 778157..780485 (+) 2329 Protein_769 peptidase G2 autoproteolytic cleavage domain-containing protein -
  BACIH_RS04010 (BACIH_0798) - 780781..782514 (+) 1734 WP_012117099.1 ABC transporter ATP-binding protein -
  BACIH_RS04015 (BACIH_0799) rcrQ 782495..784312 (+) 1818 WP_012117100.1 ABC transporter ATP-binding protein Regulator
  BACIH_RS04020 (BACIH_0800) - 784480..784884 (+) 405 WP_012117101.1 DoxX family protein -
  BACIH_RS04025 (BACIH_0801) - 784901..785758 (+) 858 WP_012117102.1 VOC family protein -
  BACIH_RS19955 - 785836..785904 (+) 69 Protein_774 hypothetical protein -
  BACIH_RS04035 (BACIH_0803) cyoE 786124..787071 (+) 948 WP_012117103.1 heme o synthase -
  BACIH_RS04040 (BACIH_0804) - 787109..787660 (-) 552 WP_012117104.1 PadR family transcriptional regulator -
  BACIH_RS04045 (BACIH_0806) - 787893..788495 (+) 603 WP_012117105.1 NAD(P)H-dependent oxidoreductase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 67501.23 Da        Isoelectric Point: 9.6320

>NTDB_id=342228 BACIH_RS04015 WP_012117100.1 782495..784312(+) (rcrQ) [Bacillus amyloliquefaciens strain V167]
MQKDIRKPFRYPKIPLKSNEGGRKRAKAKDTKGTLRRIWSYVAEKKGLLTLVIIMVVISAIFGLLGPFVIGKAIDHFIVG
QTTDGLAGVLFILFGIYLVQSLSLWFQNYWMINISQSTVFKMRSELFTHLHELPIPFFDKQRLGDLMSRVTNDIENVSST
LNTSVIQVLSSVITFVGTISVMLYMSPLLTLITLLIIPIMLLSIKWITNRTGLLFKQQQKNLGELNGFIEESISGAKVIK
AYSREDRVMEQFLEKNAALQSSGFWAQTISGFIPKVMNSLNNLSFTIIAAVGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEEHALYQPIKTGEIEFRDVSFGYQEDSLILKHLSFSVPKGQSIAFVGP
TGAGKTTVTSLIARFYEPNNGKILIDGTDIKKLTRSSLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDKEVEAAAKAAN
AHGFIERLPKGYDTVLTQNGAGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVKIQEALGRLMAGRTSVIIAHR
LNTIQKADQILVLKDGEMAEKGTHAELLSQNGFYRELYESQFRES

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=342228 BACIH_RS04015 WP_012117100.1 782495..784312(+) (rcrQ) [Bacillus amyloliquefaciens strain V167]
ATGCAAAAAGACATTCGTAAACCTTTCCGATATCCGAAAATACCGCTCAAATCAAATGAAGGCGGCAGAAAACGCGCGAA
AGCAAAAGATACAAAAGGCACGCTGCGCAGAATCTGGTCTTATGTAGCCGAGAAAAAAGGGCTTTTAACCCTTGTGATCA
TCATGGTAGTCATAAGCGCCATATTCGGCCTGCTCGGACCGTTCGTCATCGGGAAAGCGATTGATCATTTTATCGTCGGA
CAGACGACAGACGGATTGGCGGGGGTGCTGTTCATCCTGTTTGGGATTTACCTCGTGCAATCATTGTCCTTATGGTTTCA
AAACTATTGGATGATCAATATCTCGCAAAGCACCGTGTTTAAAATGCGGAGCGAGCTGTTTACCCATCTGCATGAGCTGC
CGATTCCGTTTTTTGATAAACAGCGGCTCGGGGACTTAATGAGCCGGGTCACCAATGATATCGAAAATGTCAGCTCCACT
TTAAATACATCCGTCATTCAAGTGCTGTCGAGCGTCATTACATTCGTCGGCACAATCTCCGTCATGCTGTACATGAGTCC
GCTTTTAACATTGATCACGCTTTTGATTATTCCGATCATGCTTTTGAGCATTAAATGGATCACCAACCGGACGGGATTGC
TGTTTAAGCAGCAGCAGAAAAACCTCGGCGAGCTGAACGGTTTTATTGAAGAGTCGATATCAGGGGCGAAGGTCATTAAA
GCCTATTCGAGGGAAGACCGCGTCATGGAACAATTTTTAGAAAAAAACGCGGCGTTACAATCATCGGGGTTTTGGGCGCA
GACGATTTCGGGATTCATTCCGAAAGTCATGAACTCTTTAAACAATTTAAGCTTTACGATTATAGCGGCGGTCGGCGGGC
TGTTTGCGCTGAAGGGGTGGATCTCGATCGGTTCCATCGTCGTATTCGCCGAATATTCGCGGCAGTTCACGCGCCCTTTA
AATGATTTAGCCAATCAGTTCAATACGATGTTATCGGCCATCGCCGGGGCTGAACGGGTGTTTGACGTGCTGGATGAAAA
AGAGGAGCGGGAAGATGAAGAGCATGCGCTGTACCAGCCGATCAAAACGGGAGAGATTGAATTCCGAGATGTCTCCTTCG
GCTATCAGGAAGACAGCCTGATCTTAAAACACCTGTCCTTCAGCGTTCCGAAAGGACAGTCAATCGCCTTCGTCGGACCG
ACCGGAGCGGGTAAAACAACCGTTACGAGCCTGATCGCCCGTTTTTACGAGCCGAATAACGGAAAAATCCTCATTGACGG
AACGGATATCAAAAAACTGACGAGATCCAGTCTGAGAAAAAACATGGGGTTTGTCCTGCAGGATTCCTTTCTCTTTCAGG
GCACCATCAGGGAAAATATTCGTTACGGCCGGCTGGATGCTTCTGACAAAGAGGTGGAGGCAGCCGCAAAAGCCGCCAAT
GCCCACGGATTCATCGAACGGCTCCCGAAAGGCTACGATACCGTCCTTACCCAAAACGGCGCGGGCATCAGCCAAGGACA
AAAACAGCTCATTTCCATCGCGAGAGCTGTGCTGGCGGACCCTGTGCTGCTCATTTTGGATGAAGCGACGAGCAACATTG
ATACGGTGACGGAAGTGAAAATACAAGAAGCGCTCGGCCGTTTAATGGCGGGCAGAACAAGCGTCATCATCGCTCACAGG
CTGAACACAATTCAAAAAGCCGATCAGATTCTTGTGTTGAAAGACGGCGAAATGGCTGAAAAAGGAACCCATGCCGAACT
TCTCAGCCAGAACGGGTTTTACCGGGAATTATATGAAAGCCAGTTCCGGGAATCATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(49-320)

ABC transporter (ABC_tran)

(382-531)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z2J9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.593

96.364

0.372

Multiple sequence alignment