Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ETT53_RS01925 | Genome accession | NZ_CP035446 |
| Coordinates | 344571..345062 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain emm68.2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 339571..350062
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT53_RS01895 (ETT53_01895) | - | 340861..341361 (+) | 501 | WP_129321486.1 | phosphatase PAP2 family protein | - |
| ETT53_RS01900 (ETT53_01900) | trxA | 341424..341756 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| ETT53_RS01905 (ETT53_01905) | - | 341808..342395 (-) | 588 | WP_038434251.1 | helix-turn-helix domain-containing protein | - |
| ETT53_RS01910 (ETT53_01910) | mutY | 342471..343625 (-) | 1155 | WP_164972312.1 | A/G-specific adenine glycosylase | - |
| ETT53_RS01915 (ETT53_01915) | - | 343793..344086 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| ETT53_RS01920 (ETT53_01920) | rpsF | 344259..344549 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| ETT53_RS01925 (ETT53_01925) | ssb | 344571..345062 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| ETT53_RS01930 (ETT53_01930) | rpsR | 345227..345466 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| ETT53_RS01935 (ETT53_01935) | - | 345599..346255 (-) | 657 | WP_002983144.1 | DUF1129 domain-containing protein | - |
| ETT53_RS01940 (ETT53_01940) | - | 346387..347331 (-) | 945 | WP_011888617.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=342013 ETT53_RS01925 WP_002983122.1 344571..345062(+) (ssb) [Streptococcus pyogenes strain emm68.2]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=342013 ETT53_RS01925 WP_002983122.1 344571..345062(+) (ssb) [Streptococcus pyogenes strain emm68.2]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |