Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ETT57_RS01435 Genome accession   NZ_CP035442
Coordinates   256273..258252 (+) Length   659 a.a.
NCBI ID   WP_136020940.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm25     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 251273..263252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT57_RS01415 (ETT57_01415) sufU 251319..251798 (+) 480 WP_011528251.1 Fe-S cluster assembly sulfur transfer protein SufU -
  ETT57_RS01420 (ETT57_01420) sufB 251791..253209 (+) 1419 WP_002986015.1 Fe-S cluster assembly protein SufB -
  ETT57_RS01425 (ETT57_01425) - 253361..254542 (-) 1182 WP_136048812.1 D-alanyl-D-alanine carboxypeptidase family protein -
  ETT57_RS01430 (ETT57_01430) pbp3 254710..255942 (-) 1233 WP_021299357.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  ETT57_RS01435 (ETT57_01435) amiA 256273..258252 (+) 1980 WP_136020940.1 peptide ABC transporter substrate-binding protein Regulator
  ETT57_RS01440 (ETT57_01440) amiC 258317..259819 (+) 1503 WP_002992227.1 ABC transporter permease Regulator
  ETT57_RS01445 (ETT57_01445) amiD 259819..260745 (+) 927 WP_136048813.1 oligopeptide ABC transporter permease OppC Regulator
  ETT57_RS01450 (ETT57_01450) amiE 260754..261824 (+) 1071 WP_002992231.1 ABC transporter ATP-binding protein Regulator
  ETT57_RS01455 (ETT57_01455) amiF 261817..262740 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  ETT57_RS09690 (ETT57_01460) - 262778..262867 (-) 90 WP_109821088.1 IS3 family transposase -
  ETT57_RS09385 - 262888..263067 (-) 180 WP_014635282.1 hypothetical protein -

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 72412.95 Da        Isoelectric Point: 5.1964

>NTDB_id=341792 ETT57_RS01435 WP_136020940.1 256273..258252(+) (amiA) [Streptococcus pyogenes strain emm25]
MKKSKWLAAVSVAILSVSALAACGNKNASGGSEATKTYKYVFVNDPKSLDYILTNGGGTTDVITQMVDGLLENDEYGNLV
PSLAKDWKVSKDGLTYTYTLRDGVSWYTADGEEYAPVTAEDFVTGLKHAVDDKSDALYVVEDSIKNLKAYQNGEVDFKEV
GVKALDDKTVQYTLNKPESYWNSKTTYSVLFPVNAKFLKSKGKDFGTTDPSSILVNGAYFLSAFTSKSSMEFHKNENYWD
AKNVGIESVKLTYSDGSDPGSFYKNFDKGEFSVARLYPNDPTYKSAKKNYADNITYGMLTGDIRHLTWNLNRTSFKNTKK
DPAQQDAGKKALNNKDFRQAIQFAFDRASFQAQTAGQDAKTKALRNMLVPPTFVTVGESDFGSEVEKEMAKLGDEWKDVN
LADAQDGFYNPEKAKVEFAKAKEALTAEGVTFPVQLDYPVDQANAATVQEAQSFKQSVEASLGKENVIVNVLETETSTHE
AQGFYAETPEQQDYDIISSWWGPDYQDPRTYLDIMSPVGGGSVIQKLGIKAGQNKDVVAAAGLDTYQTLLDEAAGITDDN
DARYKAYAKAQAYLTDSAVDIPVVALGGTPRVTKAVPFSGAFAWAGAKGPASVYYYKGMKLQDKPVTAKQFEKAKEKWMK
AKAKSNAKYAEKLADHVEK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=341792 ETT57_RS01435 WP_136020940.1 256273..258252(+) (amiA) [Streptococcus pyogenes strain emm25]
ATGAAGAAAAGTAAATGGTTGGCAGCTGTAAGTGTTGCGATCTTGTCAGTATCCGCTTTGGCAGCTTGTGGTAATAAAAA
TGCTTCAGGTGGCTCAGAAGCTACAAAAACCTACAAGTACGTTTTTGTTAACGATCCAAAATCATTGGATTATATTTTGA
CTAATGGCGGTGGAACGACTGATGTGATAACACAAATGGTTGATGGTCTTTTGGAAAACGATGAGTATGGTAATTTAGTA
CCATCACTTGCTAAAGATTGGAAGGTTTCAAAAGACGGTCTGACTTATACTTATACTCTTCGCGATGGTGTCTCTTGGTA
TACGGCTGATGGTGAAGAATATGCCCCAGTAACAGCAGAAGATTTTGTGACTGGTTTGAAGCACGCGGTTGACGATAAAT
CAGATGCTCTTTACGTTGTTGAAGATTCAATAAAAAACTTAAAGGCTTACCAAAATGGTGAAGTAGATTTTAAAGAAGTT
GGTGTCAAAGCCCTTGACGATAAAACTGTTCAGTATACTTTGAACAAGCCTGAAAGCTACTGGAATTCAAAAACAACTTA
TAGTGTGCTTTTCCCAGTTAATGCGAAATTTTTGAAGTCAAAAGGTAAAGATTTTGGTACAACCGATCCATCATCAATCC
TTGTTAATGGTGCTTACTTCTTGAGCGCCTTCACCTCAAAATCATCTATGGAATTCCATAAAAATGAAAACTACTGGGAT
GCTAAGAATGTTGGGATAGAATCTGTTAAATTGACTTACTCAGATGGTTCAGACCCAGGTTCGTTCTACAAGAACTTTGA
CAAGGGTGAGTTCAGCGTTGCACGACTTTACCCAAATGACCCTACCTACAAATCAGCTAAGAAAAACTATGCTGATAACA
TTACTTACGGAATGTTGACTGGAGATATCCGTCATTTAACATGGAATTTGAACCGTACTTCTTTCAAAAACACTAAGAAA
GACCCTGCACAACAAGATGCCGGTAAGAAAGCTCTTAACAACAAGGATTTTCGTCAAGCTATTCAATTTGCTTTTGACCG
AGCGTCATTCCAAGCACAAACTGCAGGTCAAGATGCCAAAACAAAAGCCTTACGTAACATGCTTGTGCCACCAACTTTTG
TAACCGTTGGAGAAAGTGATTTTGGTTCAGAAGTTGAAAAGGAAATGGCAAAACTTGGTGATGAATGGAAAGACGTTAAC
TTAGCTGATGCTCAAGATGGTTTCTATAATCCAGAAAAAGCAAAAGTTGAATTTGCAAAAGCCAAAGAAGCTTTGACAGC
TGAAGGTGTAACCTTCCCAGTTCAATTAGATTACCCTGTTGACCAGGCAAACGCAGCAACTGTTCAGGAAGCCCAGTCTT
TCAAACAATCTGTTGAAGCATCTCTTGGTAAAGAAAATGTCATTGTCAATGTTCTTGAAACAGAAACATCAACTCACGAA
GCCCAAGGCTTCTATGCTGAGACCCCAGAACAACAAGACTACGATATCATTTCATCATGGTGGGGACCAGACTACCAAGA
TCCACGGACCTACCTTGACATCATGAGTCCAGTAGGTGGTGGATCTGTTATCCAAAAACTTGGAATCAAAGCAGGTCAAA
ATAAGGATGTTGTGGCAGCTGCAGGCCTTGATACCTACCAAACTCTTCTTGATGAAGCAGCAGGAATTACAGACGACAAC
GATGCGCGCTATAAAGCTTACGCAAAAGCACAAGCCTACCTTACAGATAGTGCCGTAGATATTCCAGTTGTGGCATTGGG
TGGCACTCCTCGAGTTACTAAAGCCGTTCCATTTAGCGGTGCCTTTGCCTGGGCAGGTGCTAAAGGTCCTGCTTCTGTAT
ATTATTATAAAGGAATGAAACTTCAAGACAAACCTGTCACAGCAAAACAATTCGAAAAAGCAAAAGAAAAATGGATGAAA
GCAAAGGCTAAGTCAAATGCAAAATATGCTGAGAAGTTAGCTGATCACGTTGAAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(79-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

51.131

100

0.514
  amiA3 Streptococcus thermophilus LMG 18311

50.226

100

0.505
  amiA3 Streptococcus thermophilus LMD-9

49.925

100

0.502

Multiple sequence alignment