Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ETT58_RS08020 | Genome accession | NZ_CP035441 |
| Coordinates | 1536878..1537369 (-) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain emm1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1531878..1542369
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT58_RS08005 (ETT58_08000) | - | 1534608..1535552 (+) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
| ETT58_RS08010 (ETT58_08005) | - | 1535685..1536341 (+) | 657 | WP_010922629.1 | DUF1129 domain-containing protein | - |
| ETT58_RS08015 (ETT58_08010) | rpsR | 1536474..1536713 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| ETT58_RS08020 (ETT58_08015) | ssb | 1536878..1537369 (-) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| ETT58_RS08025 (ETT58_08020) | rpsF | 1537391..1537681 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| ETT58_RS08030 (ETT58_08025) | - | 1537854..1538147 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| ETT58_RS08035 (ETT58_08030) | mutY | 1538315..1539469 (+) | 1155 | WP_015055997.1 | A/G-specific adenine glycosylase | - |
| ETT58_RS08040 (ETT58_08035) | - | 1539545..1540132 (+) | 588 | WP_010922631.1 | helix-turn-helix domain-containing protein | - |
| ETT58_RS08045 (ETT58_08040) | trxA | 1540184..1540516 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| ETT58_RS08050 (ETT58_08045) | - | 1540579..1541079 (-) | 501 | WP_015055998.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=341765 ETT58_RS08020 WP_002983122.1 1536878..1537369(-) (ssb) [Streptococcus pyogenes strain emm1]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=341765 ETT58_RS08020 WP_002983122.1 1536878..1537369(-) (ssb) [Streptococcus pyogenes strain emm1]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |