Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   F5989_RS02150 Genome accession   NZ_CP044221
Coordinates   432567..433001 (-) Length   144 a.a.
NCBI ID   WP_002263292.1    Uniprot ID   Q8DUK6
Organism   Streptococcus mutans strain NCH105     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 427567..438001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5989_RS02130 (F5989_02165) - 427735..428169 (-) 435 WP_019319662.1 hypothetical protein -
  F5989_RS02135 (F5989_02170) tpx 428335..428820 (-) 486 WP_002263295.1 thiol peroxidase -
  F5989_RS02140 (F5989_02175) rcrQ 429017..430771 (-) 1755 WP_002263294.1 ABC transporter ATP-binding protein Regulator
  F5989_RS02145 (F5989_02180) rcrP 430761..432563 (-) 1803 WP_002263293.1 ABC transporter ATP-binding protein Regulator
  F5989_RS02150 (F5989_02185) rcrR 432567..433001 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  F5989_RS02155 (F5989_02190) queC 433553..434206 (+) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  F5989_RS02160 (F5989_02195) queD 434206..434652 (+) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  F5989_RS02165 (F5989_02200) queE 434649..435365 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -
  F5989_RS02170 (F5989_02205) queF 435378..435866 (+) 489 WP_002265143.1 preQ(1) synthase -
  F5989_RS02175 (F5989_02210) - 435975..436358 (+) 384 WP_002265142.1 DUF3021 family protein -
  F5989_RS02180 (F5989_02215) gdhA 436470..437819 (-) 1350 WP_002263849.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16720.58 Da        Isoelectric Point: 10.5126

>NTDB_id=341575 F5989_RS02150 WP_002263292.1 432567..433001(-) (rcrR) [Streptococcus mutans strain NCH105]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE

Nucleotide


Download         Length: 435 bp        

>NTDB_id=341575 F5989_RS02150 WP_002263292.1 432567..433001(-) (rcrR) [Streptococcus mutans strain NCH105]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTGTCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGGAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(31-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

100

100

1

Multiple sequence alignment