Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ETT61_RS01865 Genome accession   NZ_CP035438
Coordinates   334074..335576 (+) Length   500 a.a.
NCBI ID   WP_136020511.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 329074..340576
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS01850 (ETT61_01850) - 329127..330308 (-) 1182 WP_136020509.1 D-alanyl-D-alanine carboxypeptidase family protein -
  ETT61_RS01855 (ETT61_01855) pbp3 330476..331708 (-) 1233 WP_111676124.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  ETT61_RS01860 (ETT61_01860) amiA 332039..334009 (+) 1971 WP_136020510.1 peptide ABC transporter substrate-binding protein Regulator
  ETT61_RS01865 (ETT61_01865) amiC 334074..335576 (+) 1503 WP_136020511.1 ABC transporter permease Regulator
  ETT61_RS01870 (ETT61_01870) amiD 335576..336502 (+) 927 WP_136020512.1 oligopeptide ABC transporter permease OppC Regulator
  ETT61_RS01875 (ETT61_01875) amiE 336511..337581 (+) 1071 WP_136020513.1 ABC transporter ATP-binding protein Regulator
  ETT61_RS01880 (ETT61_01880) amiF 337574..338497 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  ETT61_RS10490 (ETT61_01885) - 338535..338624 (-) 90 WP_110002794.1 IS3 family transposase -
  ETT61_RS10080 - 338645..338890 (-) 246 WP_175393721.1 transposase -

Sequence

Protein


Download         Length: 500 a.a.        Molecular weight: 56163.54 Da        Isoelectric Point: 10.2222

>NTDB_id=341575 ETT61_RS01865 WP_136020511.1 334074..335576(+) (amiC) [Streptococcus pyogenes strain emm22.8]
MKKYILNRIMRSLVSVVLVTALTYTIVYTLVPTSLIFKQDPNYNKMTTTPDKKVAYENLTFQRMGYVNYFSSKELKDNAS
KVDSSVTTEATSANKAIYEKYIDSLGNGWQLKRFPTSKQFYAIRNIPIYERVWNFFSNLVVIDHPWKIQDKDNPKLARYI
RLEKDKSVGWSLVGSGTKHKYLLYTNGKFPYLHQNFVTLNLGTSYPTYSNIPVLQVISQGQGRTALQDVTFPSGVTKKSS
VDIYSRSYKNPKSLDDITKVNYGKGDSYTKTINNYVDPSMIHNSFVIGFFGVMFSYIVGLPLGLFMARFKNTYFDRFSTA
TMTFMLALPSIAVIYVVRFLGGMVGLPDSFPMLGASDPKSYILPVLILGILNIPTTVIWFRRYLVDLQASDWVRFARSKG
LSESEIYRGHLFKNAMVPIVSGVPASIILAIGGATLTETVFAFPGMGKMLIDSIKSANNSMIVGLTFIFTVLSIVSLLLG
DIVMSLVDPRIKLSTKKGGK

Nucleotide


Download         Length: 1503 bp        

>NTDB_id=341575 ETT61_RS01865 WP_136020511.1 334074..335576(+) (amiC) [Streptococcus pyogenes strain emm22.8]
ATGAAAAAATACATTTTAAACCGTATCATGCGATCGTTAGTGTCGGTAGTTTTGGTAACGGCTTTAACATACACCATCGT
ATATACTCTAGTACCTACCAGCCTTATCTTTAAACAAGACCCTAATTATAATAAAATGACAACAACACCAGATAAAAAAG
TAGCGTATGAAAATCTAACTTTTCAACGTATGGGTTATGTCAATTATTTTTCAAGCAAAGAATTAAAAGATAATGCTTCT
AAAGTAGATAGTAGTGTAACGACAGAAGCAACTAGTGCTAACAAAGCTATCTATGAGAAGTATATTGATTCTCTTGGCAA
TGGCTGGCAGCTAAAACGCTTCCCCACTAGCAAACAGTTTTATGCAATTCGCAATATTCCTATTTACGAACGTGTTTGGA
ACTTTTTCTCAAATCTAGTTGTTATTGATCACCCTTGGAAGATTCAGGATAAAGATAATCCAAAATTAGCTAGGTATATT
CGTCTAGAAAAAGATAAATCAGTTGGCTGGTCACTTGTTGGTTCGGGGACAAAACATAAGTATCTCCTCTATACTAACGG
AAAATTTCCTTATCTTCACCAAAACTTTGTTACCCTAAACTTAGGAACATCTTATCCAACATACAGCAATATTCCTGTTC
TTCAGGTTATTTCACAAGGGCAAGGACGAACAGCTCTTCAAGATGTCACCTTCCCATCAGGTGTCACTAAGAAATCGTCA
GTGGATATCTATAGCCGTAGCTACAAAAATCCAAAATCATTGGATGATATCACCAAGGTAAACTATGGTAAGGGAGATTC
CTACACTAAAACCATCAATAATTATGTCGACCCATCAATGATTCACAATTCTTTTGTAATTGGTTTTTTTGGTGTTATGT
TTTCCTATATCGTTGGTTTGCCTCTTGGTTTATTTATGGCTCGGTTTAAAAATACCTATTTTGACCGTTTCTCAACAGCG
ACCATGACCTTCATGCTTGCTTTACCAAGTATTGCTGTTATCTATGTTGTTCGCTTCCTAGGTGGCATGGTTGGTTTACC
AGATAGTTTCCCAATGCTGGGGGCATCTGATCCTAAATCTTATATTTTACCAGTCCTTATTTTAGGAATTTTAAATATTC
CAACTACGGTTATCTGGTTCCGTCGCTATCTTGTTGACCTTCAGGCCAGCGATTGGGTACGTTTTGCGCGTTCAAAAGGA
TTATCAGAATCTGAAATTTACAGAGGGCATCTCTTCAAAAATGCCATGGTCCCAATTGTGTCAGGGGTTCCTGCAAGTAT
TATCCTTGCTATTGGTGGTGCAACATTAACAGAGACTGTCTTTGCCTTCCCGGGTATGGGTAAAATGTTAATTGATTCTA
TTAAATCTGCTAACAATTCTATGATTGTTGGATTAACCTTTATCTTCACTGTCTTGTCAATTGTTTCACTTTTACTAGGA
GATATTGTCATGAGCCTTGTCGATCCACGTATTAAATTGTCAACAAAAAAAGGAGGTAAGTAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(299-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

59.4

100

0.594
  amiC Streptococcus thermophilus LMD-9

59

100

0.59
  amiC Streptococcus thermophilus LMG 18311

59

100

0.59

Multiple sequence alignment