Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   F5989_RS02200 Genome accession   NZ_CP044221
Coordinates   444889..446661 (-) Length   590 a.a.
NCBI ID   WP_002289667.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCH105     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 439889..451661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5989_RS02195 (F5989_02230) - 443852..444772 (-) 921 WP_002289669.1 AEC family transporter -
  F5989_RS02200 (F5989_02235) rcrQ 444889..446661 (-) 1773 WP_002289667.1 ABC transporter ATP-binding protein Regulator
  F5989_RS02205 (F5989_02240) rcrP 446672..448408 (-) 1737 WP_002289665.1 ABC transporter ATP-binding protein Regulator
  F5989_RS02210 (F5989_02245) - 448864..450732 (-) 1869 WP_002289664.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence


Protein


Download         Length: 590 a.a.        Molecular weight: 66795.61 Da        Isoelectric Point: 7.2589

>NTDB_id=341576 F5989_RS02200 WP_002289667.1 444889..446661(-) (rcrQ) [Streptococcus mutans strain NCH105]
MKKKTVFLRLWYYLKIYKGSLFLAIFLKILSSVMNVLEPFILGLVMTELTANLIDMARGVQGAHLNISYITMILFLYFLR
GLLYSIGSYGSNYFMTNAVQKSIYDLRHDLSKKINKIPVSYFDKHQFGDMLGRFTNDVETVSNALQQSFLQIINAFLTII
LVVVMVLCLNLTLAAIILVCIPLTYFSSRFILRKSQPYFKKQANALGDMNSFVQENLTGFNVIKLYGREEISAETFRTIT
ENLRDVGFKASFISGIMMPVLNAISDLAYLIVALVGGLQVLAGRLTIGNMQAFVQYIWQINQPIQTITQLSSVLQSAKSS
LERIFEVLDETDEVNQVKEKLEHDLTGQVTFHNVAFQYTEDKPLIRHFDLDVKPGQMIAVVGPTGAGKTTLINLLMRFYD
VTQGAITVDNHDIRNLSRQEYRKQFGMVLQDAWLYEGTIKDNLRFGNLQASDEEIVEAARAANVDHFIRTLPDGYNMEVN
QESNNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMSKLMEGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHQSLLADKGFYYDLYMSQFSAKTN

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=341576 F5989_RS02200 WP_002289667.1 444889..446661(-) (rcrQ) [Streptococcus mutans strain NCH105]
ATGAAAAAGAAAACTGTTTTTTTACGCTTATGGTATTATTTGAAGATCTATAAAGGTTCACTTTTTTTGGCCATTTTCTT
AAAAATACTTAGCAGTGTCATGAATGTCCTTGAACCTTTTATTTTAGGACTGGTAATGACAGAATTAACGGCTAACCTAA
TTGATATGGCTCGCGGAGTTCAAGGCGCTCATCTTAATATCAGTTATATCACCATGATTTTGTTTCTTTATTTTTTACGC
GGATTGCTGTATAGTATTGGCTCTTACGGTTCTAATTACTTTATGACTAATGCAGTGCAAAAAAGTATTTACGATTTGCG
TCATGATTTAAGTAAAAAGATTAATAAGATTCCCGTTTCCTATTTTGATAAACATCAATTTGGTGATATGTTAGGACGTT
TTACTAATGACGTTGAAACGGTCTCTAACGCTTTGCAGCAGAGCTTTCTGCAAATTATTAATGCCTTTTTAACGATTATC
CTTGTTGTGGTTATGGTACTCTGCCTTAATTTGACCTTGGCGGCGATTATTCTTGTTTGTATTCCGCTGACTTATTTCAG
TTCTCGTTTTATTTTAAGGAAATCACAGCCTTATTTTAAAAAACAGGCTAATGCTTTAGGGGATATGAACAGTTTTGTTC
AGGAAAACTTAACGGGCTTTAATGTCATAAAACTCTATGGACGTGAAGAAATATCTGCTGAAACCTTTCGAACTATCACA
GAAAATTTACGAGATGTCGGCTTTAAAGCCAGTTTTATTTCTGGAATAATGATGCCAGTTCTTAATGCTATCTCAGACTT
AGCTTATTTGATTGTTGCATTAGTTGGCGGCCTGCAGGTCTTAGCAGGGAGACTGACTATTGGTAATATGCAGGCCTTTG
TTCAATATATTTGGCAAATCAATCAGCCTATTCAGACCATCACACAATTATCAAGTGTTCTTCAAAGTGCTAAATCTTCT
CTAGAACGTATTTTTGAGGTTTTGGATGAAACAGACGAAGTCAATCAAGTCAAGGAAAAGCTGGAACATGATTTGACAGG
GCAAGTGACATTTCATAATGTCGCCTTTCAATATACTGAGGATAAGCCTTTAATTCGACATTTTGATTTAGATGTTAAAC
CGGGTCAGATGATTGCTGTTGTTGGTCCGACCGGGGCGGGTAAGACAACTCTTATCAATCTTTTGATGCGTTTTTATGAT
GTTACCCAAGGAGCGATTACAGTAGATAATCATGATATCCGTAACCTTTCCCGTCAGGAATATCGGAAACAATTTGGGAT
GGTTCTTCAAGATGCTTGGTTATATGAAGGGACGATCAAAGACAATTTGCGCTTTGGAAATTTGCAGGCAAGTGATGAGG
AAATTGTCGAAGCGGCCAGGGCAGCTAATGTCGATCATTTTATCCGAACCCTTCCAGACGGTTATAATATGGAAGTCAAT
CAAGAATCTAATAATATTTCTTTGGGGCAAAAGCAATTGTTAACCATAGCACGAGCGCTGCTGGCTGATCCCAAAATTCT
GATTCTGGATGAAGCGACTTCTTCAGTTGATACTCGTTTGGAACTTCTCATTCAAAAAGCTATGAGTAAGCTTATGGAAG
GCCGCACTAGTTTTGTTATTGCTCATCGTCTTTCAACTATCCAAGAAGCGGATAAGATCCTTGTCCTTAAGGATGGTCAA
ATTATTGAACAGGGGAACCACCAAAGTCTCTTAGCTGACAAGGGCTTCTATTATGATTTGTATATGAGTCAGTTTAGCGC
TAAAACCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.857

100

0.451


Multiple sequence alignment