Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   ETT61_RS01875 Genome accession   NZ_CP035438
Coordinates   336511..337581 (+) Length   356 a.a.
NCBI ID   WP_136020513.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 331511..342581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS01860 (ETT61_01860) amiA 332039..334009 (+) 1971 WP_136020510.1 peptide ABC transporter substrate-binding protein Regulator
  ETT61_RS01865 (ETT61_01865) amiC 334074..335576 (+) 1503 WP_136020511.1 ABC transporter permease Regulator
  ETT61_RS01870 (ETT61_01870) amiD 335576..336502 (+) 927 WP_136020512.1 oligopeptide ABC transporter permease OppC Regulator
  ETT61_RS01875 (ETT61_01875) amiE 336511..337581 (+) 1071 WP_136020513.1 ABC transporter ATP-binding protein Regulator
  ETT61_RS01880 (ETT61_01880) amiF 337574..338497 (+) 924 WP_002986000.1 ABC transporter ATP-binding protein Regulator
  ETT61_RS10490 (ETT61_01885) - 338535..338624 (-) 90 WP_110002794.1 IS3 family transposase -
  ETT61_RS10080 - 338645..338890 (-) 246 WP_175393721.1 transposase -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 39729.81 Da        Isoelectric Point: 5.4774

>NTDB_id=341577 ETT61_RS01875 WP_136020513.1 336511..337581(+) (amiE) [Streptococcus pyogenes strain emm22.8]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TDLKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSYAKAKEMALDYMNKVGIPNAKKRFEDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIVELLKSLQREYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLADESGELYAIPGTPPSLYSPIIGDAFALRSEYAMVLDFEKAPPAINVSETHWAK
TWLLHPEAPKVQKPEVIQDLHQKILRKMSQQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=341577 ETT61_RS01875 WP_136020513.1 336511..337581(+) (amiE) [Streptococcus pyogenes strain emm22.8]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTAGAATTTGATGTGCGTGATCGTGTTTTAACAGC
TATCCGTAACGTCTCACTGGAACTTGTTGAAGGAGAAGTCCTTGCTTTTGTAGGGGAATCAGGCTCAGGTAAATCTGTTT
TAACAAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGCATTGCTAATGGTTCAATTGTCTATCGTGGGCAAGAATTG
ACAGATTTAAAAACAAATAAAGAGTGGGCAAAGATTCGCGGCTCAAAAATCGCAACGATTTTCCAAGACCCAATGACCAG
TCTTAGTCCCATTAAAACTATCGGTAGCCAAATCACAGAAGTGATTATTAAGCACCAAAAAGTAAGTTATGCCAAAGCTA
AAGAAATGGCCCTTGATTACATGAATAAAGTGGGTATCCCAAATGCCAAAAAACGCTTTGAAGATTACCCATTTGAGTAT
TCAGGAGGAATGCGTCAACGTATTGTTATCGCTATTGCTTTAGCTTGTCGCCCAGATATTCTTATCTGTGATGAGCCAAC
AACAGCCCTTGATGTGACTATTCAAGCTCAAATCGTTGAGTTATTGAAGTCGCTTCAACGAGAATATCATTTCACCATTA
TCTTTATTACGCACGATTTAGGTGTTGTGGCAAGCATTGCAGATAAAGTGGCTGTCATGTATGCAGGAGAAATTGTTGAA
TTTGGAACAGTCGAAGAGATTTTCTATGATCCAAGACACCCCTATACATGGAGTTTGCTGTCTAGCTTACCGCAGTTGGC
AGATGAATCTGGTGAACTTTACGCTATTCCAGGAACGCCTCCATCACTTTATTCACCAATTATCGGAGATGCCTTTGCAC
TTCGCTCAGAATATGCTATGGTTTTAGACTTTGAAAAAGCACCTCCGGCGATTAACGTATCTGAGACTCATTGGGCCAAA
ACATGGCTTTTACACCCAGAGGCTCCAAAAGTTCAAAAACCAGAAGTCATTCAAGATTTGCATCAAAAAATCTTAAGGAA
AATGTCACAACAGGAGGAAGGAAATGTCTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(29-187)

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(239-299)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

76.667

100

0.775
  amiE Streptococcus thermophilus LMG 18311

75.556

100

0.764
  amiE Streptococcus thermophilus LMD-9

75.556

100

0.764
  oppD Streptococcus mutans UA159

56.677

94.663

0.537

Multiple sequence alignment