Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETT62_RS09395 Genome accession   NZ_CP035437
Coordinates   54176..54271 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm78.3     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49176..59271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT62_RS00320 (ETT62_00320) - 50044..51741 (+) 1698 WP_020904816.1 AIPR family protein -
  ETT62_RS00325 (ETT62_00325) purB 51759..53051 (+) 1293 WP_136037925.1 adenylosuccinate lyase -
  ETT62_RS00330 (ETT62_00330) comR 53181..54092 (+) 912 WP_002986681.1 transcriptional regulator Rgg4/ComR Regulator
  ETT62_RS09395 comS 54176..54271 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  ETT62_RS00335 (ETT62_00335) ruvB 54318..55316 (+) 999 WP_011054100.1 Holliday junction branch migration DNA helicase RuvB -
  ETT62_RS00340 (ETT62_00340) - 55454..55891 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  ETT62_RS00345 (ETT62_00345) - 55914..56315 (+) 402 WP_136121124.1 MORN repeat-containing protein -
  ETT62_RS00350 (ETT62_00350) - 56312..58087 (+) 1776 WP_002994672.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=341561 ETT62_RS09395 WP_198462994.1 54176..54271(+) (comS) [Streptococcus pyogenes strain emm78.3]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=341561 ETT62_RS09395 WP_198462994.1 54176..54271(+) (comS) [Streptococcus pyogenes strain emm78.3]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452

Multiple sequence alignment