Detailed information NTG0034156

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: SALIVB_RS00385
• Genome accession: NC_015760
• Coordinates: 63792..64382 (+)
• Length: 196 a.a.
• NCBI ID: WP_013989915.1
• Uniprot ID: -
• Organism: Streptococcus salivarius CCHSS3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 58792..69382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SALIVB_RS00360 (SALIVB_0070)	-	59920..60375 (-)	456	WP_013989910.1	DUF3021 domain-containing protein	-
SALIVB_RS00365 (SALIVB_0071)	-	60372..60809 (-)	438	WP_013989911.1	LytTR family DNA-binding domain-containing protein	-
SALIVB_RS00370 (SALIVB_0072)	-	60988..61293 (+)	306	WP_013989912.1	hypothetical protein	-
SALIVB_RS00375 (SALIVB_0073)	hexB	61345..63282 (+)	1938	WP_013989913.1	DNA mismatch repair endonuclease MutL	Machinery gene
SALIVB_RS00380 (SALIVB_0074)	-	63413..63634 (+)	222	WP_013989914.1	hypothetical protein	-
SALIVB_RS00385 (SALIVB_0075)	ruvA	63792..64382 (+)	591	WP_013989915.1	Holliday junction branch migration protein RuvA	Machinery gene
SALIVB_RS00390 (SALIVB_0076)	-	64391..64945 (+)	555	WP_013989916.1	DNA-3-methyladenine glycosylase I	-
SALIVB_RS00395 (SALIVB_0077)	cinA	65042..66307 (+)	1266	WP_013989917.1	competence/damage-inducible protein A	Machinery gene
SALIVB_RS00400 (SALIVB_0078)	recA	66348..67487 (+)	1140	WP_013989918.1	recombinase RecA	Machinery gene
SALIVB_RS00405 (SALIVB_0079)	spx	67656..68054 (+)	399	WP_002886328.1	transcriptional regulator Spx	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21724.18 Da
• Isoelectric Point: 5.6710

>NTDB_id=34156 SALIVB_RS00385 WP_013989915.1 63792..64382(+) (ruvA) [Streptococcus salivarius CCHSS3]
MYDYIKGTLVKITAKYIVIEANGLGYIVTVANPYSFSDQMNQTIQVYLHQVIRDDAHLLFGFHTEDEKEVFLKLISVSGI
GPTTALAIVAVDDNQGLVAAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFAELPTETTKTIPSQPEGNHQLDEAMEALL
ALGYKAAELKKIKAFFEGTNETAEQYIKSALKMLMK

Nucleotide

• Length: 591 bp

>NTDB_id=34156 SALIVB_RS00385 WP_013989915.1 63792..64382(+) (ruvA) [Streptococcus salivarius CCHSS3]
ATGTATGATTACATCAAGGGAACTCTAGTGAAAATTACCGCCAAGTATATTGTTATAGAAGCAAACGGCTTAGGCTATAT
TGTTACTGTAGCGAACCCATATAGTTTTTCTGACCAGATGAATCAGACTATCCAAGTCTACCTTCATCAGGTTATTAGGG
ATGACGCCCACCTTCTTTTTGGTTTCCATACTGAAGATGAAAAAGAGGTCTTCCTTAAGCTTATTTCAGTTTCTGGAATA
GGTCCGACGACTGCTCTAGCCATTGTTGCTGTAGATGATAATCAAGGCTTGGTTGCTGCCATTGATAATAGTGACATCAA
GTACTTGATGAAGTTTCCAAAGATTGGTAAAAAGACAGCCCAGCAAATGGTTCTAGACTTGGCAGGGAAATTTGCAGAGT
TACCAACAGAAACGACCAAGACGATACCAAGTCAACCTGAAGGGAATCATCAGTTGGATGAGGCTATGGAAGCCTTGCTT
GCTCTTGGTTATAAAGCTGCAGAACTTAAGAAAATCAAAGCCTTCTTCGAAGGTACTAATGAAACGGCAGAGCAATACAT
TAAATCAGCTCTTAAGATGTTGATGAAATGA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (152-195)

• RuvA N terminal domain (RuvA_N) (1-61)

• Helix-hairpin-helix domain (HHH_5) (71-127)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	65.5	100	0.668
ruvA	Streptococcus pneumoniae R6	65.5	100	0.668
ruvA	Streptococcus pneumoniae D39	65.5	100	0.668
ruvA	Bacillus subtilis subsp. subtilis str. 168	41.379	100	0.429