Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ETT62_RS01800 | Genome accession | NZ_CP035437 |
| Coordinates | 333945..334436 (+) | Length | 163 a.a. |
| NCBI ID | WP_136116358.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain emm78.3 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 328945..339436
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT62_RS01770 (ETT62_01770) | - | 330134..330634 (+) | 501 | WP_021775467.1 | phosphatase PAP2 family protein | - |
| ETT62_RS01775 (ETT62_01775) | trxA | 330697..331029 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| ETT62_RS01780 (ETT62_01780) | - | 331081..331668 (-) | 588 | WP_136121115.1 | helix-turn-helix domain-containing protein | - |
| ETT62_RS01785 (ETT62_01785) | mutY | 331845..332999 (-) | 1155 | WP_168643147.1 | A/G-specific adenine glycosylase | - |
| ETT62_RS01790 (ETT62_01790) | - | 333167..333460 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| ETT62_RS01795 (ETT62_01795) | rpsF | 333633..333923 (+) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| ETT62_RS01800 (ETT62_01800) | ssb | 333945..334436 (+) | 492 | WP_136116358.1 | single-stranded DNA-binding protein | Machinery gene |
| ETT62_RS01805 (ETT62_01805) | rpsR | 334601..334840 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| ETT62_RS01810 (ETT62_01810) | - | 334973..335629 (-) | 657 | WP_136018143.1 | DUF1129 domain-containing protein | - |
| ETT62_RS01815 (ETT62_01815) | - | 335761..336705 (-) | 945 | WP_011888617.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17949.70 Da Isoelectric Point: 4.8894
>NTDB_id=341529 ETT62_RS01800 WP_136116358.1 333945..334436(+) (ssb) [Streptococcus pyogenes strain emm78.3]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPVDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPVDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=341529 ETT62_RS01800 WP_136116358.1 333945..334436(+) (ssb) [Streptococcus pyogenes strain emm78.3]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGGTGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGGTGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |