Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   ETT66_RS04410 Genome accession   NZ_CP035433
Coordinates   872903..874213 (+) Length   436 a.a.
NCBI ID   WP_011184551.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm65     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 867903..879213
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT66_RS04390 (ETT66_04390) phoU 868494..869147 (+) 654 WP_002984514.1 phosphate signaling complex protein PhoU -
  ETT66_RS04400 (ETT66_04400) - 869352..871889 (+) 2538 WP_030127235.1 M1 family metallopeptidase -
  ETT66_RS04405 (ETT66_04405) ciaR 872236..872910 (+) 675 WP_010922355.1 response regulator transcription factor Regulator
  ETT66_RS04410 (ETT66_04410) ciaH 872903..874213 (+) 1311 WP_011184551.1 cell wall metabolism sensor histidine kinase WalK Regulator
  ETT66_RS04415 (ETT66_04415) rpsT 874338..874586 (-) 249 WP_009881183.1 30S ribosomal protein S20 -
  ETT66_RS04420 (ETT66_04420) coaA 874640..875560 (-) 921 WP_014407609.1 type I pantothenate kinase -
  ETT66_RS04425 (ETT66_04425) - 875828..876421 (+) 594 WP_136286245.1 class I SAM-dependent methyltransferase -
  ETT66_RS04430 (ETT66_04430) - 877073..877462 (+) 390 WP_011285547.1 cytidine deaminase -
  ETT66_RS04435 (ETT66_04435) - 877556..878608 (+) 1053 WP_136286244.1 BMP family protein -

Sequence


Protein


Download         Length: 436 a.a.        Molecular weight: 50093.61 Da        Isoelectric Point: 9.0837

>NTDB_id=341329 ETT66_RS04410 WP_011184551.1 872903..874213(+) (ciaH) [Streptococcus pyogenes strain emm65]
MNKLKKEILSDNYNHFFHFFAVFTGIFVIMTIIILQIMRFGVYSSVDSSLVSVSNNASSYANRTMARISSFYFDTENNII
KALPDSDSSKLLGTPAANTDIILFSANGTILNAFDAFSNYQNFHLDKHRLGSIETTSLMNFYGQEEKYHTITVRVHIKNY
PAVAYMMAVVNVEQLDRANERYERIIIIVMSVFWLISILASIYLAKWSRKPILESYEKQKMFVENASHELRTPLAVLQNR
LESLFRKPNETILENSEHLASSLDEVRNMRILTTNLLNLARRDDGINPQWTHLDTDFFNAIFENYELVAKEYGKIFYFQN
QVNRSLRMDKALLKQLITILFDNAIKYTDKNGIIEIIVKTTDKNLLISVIDNGPGITDEEKKKIFDRFYRVDKARTRQTG
GFGLGLALAQQIVMSLKGNITVKDNDPKGSIFEVKL

Nucleotide


Download         Length: 1311 bp        

>NTDB_id=341329 ETT66_RS04410 WP_011184551.1 872903..874213(+) (ciaH) [Streptococcus pyogenes strain emm65]
ATGAATAAATTAAAAAAAGAGATTTTATCAGATAACTATAACCACTTTTTTCATTTTTTTGCGGTTTTTACAGGTATTTT
TGTCATTATGACTATTATTATCTTACAGATTATGCGGTTTGGCGTTTATTCGTCAGTTGACAGTAGTTTAGTTTCTGTTA
GTAATAATGCAAGTAGCTATGCTAATCGTACGATGGCTAGAATATCTTCTTTTTACTTTGATACTGAAAATAACATTATT
AAGGCGCTGCCTGATTCAGATAGTTCTAAGTTATTAGGAACGCCTGCAGCTAATACAGATATCATTTTGTTTAGTGCTAA
TGGAACAATTTTAAATGCTTTTGATGCGTTTTCTAACTATCAAAATTTTCATTTAGATAAACACCGTTTGGGGAGTATTG
AAACCACCAGTTTAATGAATTTTTATGGACAAGAAGAAAAATACCATACGATAACCGTAAGGGTTCATATCAAAAATTAT
CCTGCAGTTGCCTATATGATGGCAGTAGTAAATGTGGAACAATTAGACCGCGCTAATGAACGTTACGAGCGCATTATTAT
TATAGTTATGAGTGTTTTTTGGCTAATTTCTATTTTAGCAAGTATTTATTTAGCCAAGTGGAGCAGAAAACCTATTTTAG
AAAGCTATGAAAAACAAAAAATGTTTGTTGAAAATGCTAGTCATGAACTAAGGACCCCTTTGGCGGTCTTACAGAATCGT
CTGGAATCGCTTTTTCGTAAGCCCAACGAAACGATATTAGAAAATAGTGAGCATCTCGCTTCTAGTTTAGACGAGGTTCG
CAACATGCGCATCTTAACAACTAATTTATTAAATTTAGCAAGACGAGATGATGGCATTAATCCACAGTGGACTCATTTAG
ATACAGATTTTTTTAATGCTATTTTTGAGAATTATGAACTAGTTGCTAAAGAATATGGAAAAATATTTTATTTTCAGAAC
CAAGTCAATAGATCGTTAAGAATGGATAAGGCTTTACTAAAACAATTAATAACGATTTTATTTGACAATGCTATTAAATA
TACAGATAAAAATGGTATTATTGAAATTATAGTGAAAACAACGGACAAAAATTTATTAATTTCTGTTATTGATAATGGTC
CAGGGATAACAGATGAAGAAAAGAAAAAGATTTTTGATCGTTTTTATCGAGTTGACAAAGCTAGAACACGGCAAACAGGT
GGATTTGGCTTGGGGTTGGCTTTAGCTCAGCAAATCGTGATGTCTTTAAAAGGAAATATTACAGTAAAGGATAATGATCC
TAAAGGTAGTATTTTTGAAGTCAAACTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

57.895

100

0.58

  ciaH Streptococcus pneumoniae Rx1

51.37

100

0.516

  ciaH Streptococcus pneumoniae D39

51.37

100

0.516

  ciaH Streptococcus pneumoniae R6

51.37

100

0.516

  ciaH Streptococcus pneumoniae TIGR4

51.37

100

0.516


Multiple sequence alignment