Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ETT66_RS01840 | Genome accession | NZ_CP035433 |
| Coordinates | 341563..342054 (+) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0A9X8XIP7 |
| Organism | Streptococcus pyogenes strain emm65 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 336563..347054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT66_RS01810 (ETT66_01810) | - | 337853..338353 (+) | 501 | WP_015055998.1 | phosphatase PAP2 family protein | - |
| ETT66_RS01815 (ETT66_01815) | trxA | 338416..338748 (+) | 333 | WP_001932060.1 | thioredoxin | - |
| ETT66_RS01820 (ETT66_01820) | - | 338800..339387 (-) | 588 | WP_032462795.1 | helix-turn-helix domain-containing protein | - |
| ETT66_RS01825 (ETT66_01825) | mutY | 339463..340617 (-) | 1155 | WP_002988276.1 | A/G-specific adenine glycosylase | - |
| ETT66_RS01830 (ETT66_01830) | - | 340785..341078 (+) | 294 | WP_002983113.1 | hypothetical protein | - |
| ETT66_RS01835 (ETT66_01835) | rpsF | 341251..341541 (+) | 291 | WP_063632424.1 | 30S ribosomal protein S6 | - |
| ETT66_RS01840 (ETT66_01840) | ssb | 341563..342054 (+) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| ETT66_RS01845 (ETT66_01845) | rpsR | 342219..342458 (+) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| ETT66_RS01850 (ETT66_01850) | - | 342591..343247 (-) | 657 | WP_010922629.1 | DUF1129 domain-containing protein | - |
| ETT66_RS01855 (ETT66_01855) | - | 343379..344323 (-) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=341317 ETT66_RS01840 WP_002983122.1 341563..342054(+) (ssb) [Streptococcus pyogenes strain emm65]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=341317 ETT66_RS01840 WP_002983122.1 341563..342054(+) (ssb) [Streptococcus pyogenes strain emm65]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCCTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |