Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ETT72_RS07905 | Genome accession | NZ_CP035427 |
| Coordinates | 1521389..1521880 (-) | Length | 163 a.a. |
| NCBI ID | WP_023605268.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain emm74 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1516389..1526880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETT72_RS07890 (ETT72_07885) | - | 1519120..1520064 (+) | 945 | WP_002983147.1 | magnesium transporter CorA family protein | - |
| ETT72_RS07895 (ETT72_07890) | - | 1520196..1520852 (+) | 657 | WP_136282123.1 | DUF1129 domain-containing protein | - |
| ETT72_RS07900 (ETT72_07895) | rpsR | 1520985..1521224 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| ETT72_RS07905 (ETT72_07900) | ssb | 1521389..1521880 (-) | 492 | WP_023605268.1 | single-stranded DNA-binding protein | Machinery gene |
| ETT72_RS07910 (ETT72_07905) | rpsF | 1521902..1522192 (-) | 291 | WP_002983117.1 | 30S ribosomal protein S6 | - |
| ETT72_RS07915 (ETT72_07910) | - | 1522365..1522658 (-) | 294 | WP_002983113.1 | hypothetical protein | - |
| ETT72_RS07920 (ETT72_07915) | mutY | 1522826..1523980 (+) | 1155 | WP_315940787.1 | A/G-specific adenine glycosylase | - |
| ETT72_RS07925 (ETT72_07920) | - | 1524157..1524750 (+) | 594 | WP_032464539.1 | helix-turn-helix domain-containing protein | - |
| ETT72_RS07930 (ETT72_07925) | trxA | 1524796..1525128 (-) | 333 | WP_256363924.1 | thioredoxin | - |
| ETT72_RS07935 (ETT72_07930) | - | 1525191..1525691 (-) | 501 | WP_023609923.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17993.81 Da Isoelectric Point: 4.8894
>NTDB_id=341020 ETT72_RS07905 WP_023605268.1 1521389..1521880(-) (ssb) [Streptococcus pyogenes strain emm74]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNISSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNISSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=341020 ETT72_RS07905 WP_023605268.1 1521389..1521880(-) (ssb) [Streptococcus pyogenes strain emm74]
ATGATTAATAATGTAGTACTAGTTGGTCGCATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGGTTTAACAATAACATTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACACCTAACTTTGGAAGAGATGATAGCCCATTTGGCAATTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGCATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAGCGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGCCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGGTTTAACAATAACATTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACACCTAACTTTGGAAGAGATGATAGCCCATTTGGCAATTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |