Detailed information NTG0034084

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SGPB_RS03035
• Genome accession: NC_015600
• Coordinates: 570442..571413 (+)
• Length: 323 a.a.
• NCBI ID: WP_013851607.1
• Uniprot ID: F5X5H0
• Organism: Streptococcus pasteurianus ATCC 43144
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 565442..576413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGPB_RS03005 (SGPB_0544)	sodA	565546..566154 (+)	609	WP_013851603.1	superoxide dismutase SodA	-
SGPB_RS03010 (SGPB_0545)	-	566303..567028 (+)	726	WP_013851604.1	YebC/PmpR family DNA-binding transcriptional regulator	-
SGPB_RS03015 (SGPB_0546)	queA	567060..568088 (-)	1029	WP_003063841.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
SGPB_RS03020 (SGPB_0547)	-	568264..568764 (+)	501	WP_003063844.1	VIT1/CCC1 transporter family protein	-
SGPB_RS03025 (SGPB_0548)	nagB	568892..569596 (+)	705	WP_013851605.1	glucosamine-6-phosphate deaminase	-
SGPB_RS03030 (SGPB_0549)	-	569672..570388 (+)	717	WP_013851606.1	pseudouridine synthase	-
SGPB_RS03035 (SGPB_0550)	coiA	570442..571413 (+)	972	WP_013851607.1	competence protein CoiA	Machinery gene
SGPB_RS03040 (SGPB_0551)	pepF	571403..573205 (+)	1803	WP_013851608.1	oligoendopeptidase F	Regulator
SGPB_RS03045 (SGPB_0552)	-	573278..573796 (+)	519	WP_013851609.1	GNAT family N-acetyltransferase	-
SGPB_RS03050 (SGPB_0553)	-	573818..574429 (+)	612	WP_003063855.1	HAD-IA family hydrolase	-
SGPB_RS03055 (SGPB_0554)	-	574483..575184 (+)	702	WP_013851610.1	O-methyltransferase	-
SGPB_RS03060 (SGPB_0555)	-	575254..576291 (+)	1038	WP_013851611.1	peptidyl-prolyl cis-trans isomerase	-

Sequence

Protein

• Length: 323 a.a.
• Molecular weight: 38106.66 Da
• Isoelectric Point: 8.5355

>NTDB_id=34084 SGPB_RS03035 WP_013851607.1 570442..571413(+) (coiA) [Streptococcus pasteurianus ATCC 43144]
MLSALDENGRLVSLLDGIPANQNFVCPACRSAVRLKNGKVMRPHFAHVSLDKCDFYSENESSEHLQLKAALYHAVSRTEQ
VVVEKVLPDLHQVADLFVNDNLALEVQCSRLSEQRLFQRTKAYQSHGIQVLWLLGEKLWLGNRLSPLQRHFLYFSQNMGF
HLWELDVTKQLIRLHYLIYEDLHGKVHYLTKTCSFSDDIMAFFRLPYRQQKLSTYEVNQDQTLLTYIQKQLSSRHSIWLK
RQEKAYLKGKNLLSLPLSAYFPQVRPFDFVEGFCQISQDLSPFYENFHRFYQNQTEKERQWLYPPAYYDKMVNKPQKGEC
DVR

Nucleotide

• Length: 972 bp

>NTDB_id=34084 SGPB_RS03035 WP_013851607.1 570442..571413(+) (coiA) [Streptococcus pasteurianus ATCC 43144]
GTGTTATCAGCGCTTGATGAAAATGGAAGATTAGTATCCTTGTTAGATGGTATCCCAGCTAACCAAAACTTTGTTTGCCC
AGCTTGCCGCTCTGCTGTCCGTTTAAAAAATGGCAAAGTTATGCGTCCGCACTTTGCTCATGTTTCTTTGGATAAGTGTG
ATTTTTATAGTGAAAATGAAAGCAGTGAGCACCTTCAGTTAAAAGCGGCGCTTTATCATGCTGTGTCGCGGACTGAACAA
GTCGTGGTTGAAAAAGTTTTACCAGATTTACATCAGGTGGCTGATTTATTTGTCAATGATAATTTGGCTTTAGAAGTGCA
ATGTTCGCGCTTATCAGAACAGCGATTATTTCAACGCACAAAAGCCTATCAAAGTCATGGTATTCAAGTACTTTGGTTGT
TGGGGGAAAAGTTGTGGCTTGGCAATCGTTTATCACCTTTGCAACGTCATTTTCTTTATTTTTCGCAGAATATGGGCTTT
CATTTGTGGGAGTTGGATGTCACAAAACAACTCATTCGTTTACATTATTTAATCTATGAAGATTTGCATGGCAAGGTTCA
CTATCTAACCAAGACTTGTTCATTTTCAGATGATATTATGGCATTTTTTCGACTTCCTTATCGACAGCAGAAGCTTTCAA
CTTACGAGGTAAACCAAGACCAAACCTTATTAACCTATATTCAAAAACAGTTATCTTCTCGCCATTCAATTTGGTTAAAA
AGGCAAGAAAAAGCTTATTTAAAAGGGAAAAATTTGCTAAGTTTGCCTTTATCGGCTTATTTTCCACAAGTTCGTCCTTT
TGATTTTGTTGAGGGGTTCTGTCAGATTTCGCAAGATTTATCACCGTTTTACGAAAATTTTCATCGCTTTTATCAAAATC
AAACAGAAAAAGAACGTCAATGGCTTTATCCGCCAGCTTATTATGATAAAATGGTAAATAAACCTCAAAAAGGAGAATGT
GATGTCAGATAA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (20-267)

3D structure

• AlphaFold DB: F5X5H0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	49.196	96.285	0.474
coiA	Streptococcus pneumoniae Rx1	48.232	96.285	0.464
coiA	Streptococcus pneumoniae D39	48.232	96.285	0.464
coiA	Streptococcus pneumoniae R6	48.232	96.285	0.464
coiA	Streptococcus pneumoniae TIGR4	48.232	96.285	0.464
coiA	Lactococcus lactis subsp. cremoris KW2	40.308	100	0.406