Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ETA10_RS21705 | Genome accession | NZ_CP035397 |
| Coordinates | 4035824..4036342 (-) | Length | 172 a.a. |
| NCBI ID | WP_003219228.1 | Uniprot ID | A0A063XE16 |
| Organism | Bacillus subtilis strain SRCM103773 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 3989261..4035809 | 4035824..4036342 | flank | 15 |
Gene organization within MGE regions
Location: 3989261..4036342
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETA10_RS21410 (ETA10_21410) | yybO | 3989677..3990987 (+) | 1311 | WP_087614837.1 | MFS transporter | - |
| ETA10_RS21415 (ETA10_21415) | - | 3991147..3991884 (+) | 738 | WP_032676932.1 | MerR family transcriptional regulator | - |
| ETA10_RS21420 (ETA10_21420) | - | 3991922..3992710 (-) | 789 | WP_014481489.1 | hypothetical protein | - |
| ETA10_RS21425 (ETA10_21425) | yybH | 3992778..3993167 (-) | 390 | WP_017695798.1 | nuclear transport factor 2 family protein | - |
| ETA10_RS21430 (ETA10_21430) | yybG | 3993313..3994152 (+) | 840 | WP_087614838.1 | pentapeptide repeat-containing protein | - |
| ETA10_RS21435 (ETA10_21435) | yybF | 3994187..3995401 (-) | 1215 | WP_087614839.1 | MFS transporter | - |
| ETA10_RS21440 (ETA10_21440) | yybE | 3995588..3996466 (+) | 879 | WP_044052403.1 | LysR family transcriptional regulator | - |
| ETA10_RS21445 (ETA10_21445) | yybD | 3996480..3996923 (+) | 444 | WP_003226881.1 | GNAT family N-acetyltransferase | - |
| ETA10_RS21450 (ETA10_21450) | yybC | 3997006..3997485 (+) | 480 | WP_087614840.1 | DUF2798 domain-containing protein | - |
| ETA10_RS21460 (ETA10_21460) | yybB | 3997658..3998320 (-) | 663 | WP_087614841.1 | MBL fold metallo-hydrolase | - |
| ETA10_RS21465 (ETA10_21465) | yybA | 3998467..3998919 (-) | 453 | WP_003226875.1 | MarR family transcriptional regulator | - |
| ETA10_RS21470 (ETA10_21470) | yyaT | 3999039..3999485 (+) | 447 | WP_003226873.1 | GNAT family N-acetyltransferase | - |
| ETA10_RS21475 (ETA10_21475) | yyaS | 3999482..4000084 (+) | 603 | WP_003226872.1 | YitT family protein | - |
| ETA10_RS21480 (ETA10_21480) | satA | 4000152..4000673 (-) | 522 | WP_003226870.1 | streptothricin N-acetyltransferase SatA | - |
| ETA10_RS21485 (ETA10_21485) | yyaQ | 4001082..4001438 (+) | 357 | WP_046161080.1 | MmcQ/YjbR family DNA-binding protein | - |
| ETA10_RS21490 (ETA10_21490) | yyaP | 4001598..4002164 (+) | 567 | WP_046161081.1 | dihydrofolate reductase family protein | - |
| ETA10_RS21495 (ETA10_21495) | - | 4002406..4002567 (+) | 162 | WP_129110614.1 | DUF255 domain-containing protein | - |
| ETA10_RS21500 (ETA10_21500) | tet(L) | 4002670..4004046 (-) | 1377 | WP_128738555.1 | tetracycline efflux MFS transporter Tet(L) | - |
| ETA10_RS22820 | tetL | 4004080..4004142 (-) | 63 | WP_010886645.1 | tetracycline resistance efflux system leader peptide | - |
| ETA10_RS21510 (ETA10_21510) | - | 4004395..4004565 (+) | 171 | Protein_4161 | DUF255 domain-containing protein | - |
| ETA10_RS21515 (ETA10_21515) | - | 4004642..4005061 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| ETA10_RS21520 (ETA10_21520) | acr3 | 4005073..4006113 (-) | 1041 | WP_119900017.1 | arsenite efflux transporter Acr3 | - |
| ETA10_RS21525 (ETA10_21525) | - | 4006135..4006575 (-) | 441 | WP_119900019.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| ETA10_RS21530 (ETA10_21530) | arsR | 4006635..4006952 (-) | 318 | WP_029318103.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| ETA10_RS21535 (ETA10_21535) | - | 4007227..4008735 (+) | 1509 | WP_119900021.1 | recombinase family protein | - |
| ETA10_RS21540 (ETA10_21540) | - | 4008835..4009617 (-) | 783 | WP_119900023.1 | hypothetical protein | - |
| ETA10_RS21545 (ETA10_21545) | - | 4009719..4010111 (-) | 393 | WP_205590911.1 | cystatin-like fold lipoprotein | - |
| ETA10_RS21550 (ETA10_21550) | - | 4010165..4010671 (-) | 507 | WP_119900027.1 | hypothetical protein | - |
| ETA10_RS21555 (ETA10_21555) | - | 4010686..4011675 (-) | 990 | WP_119900029.1 | bifunctional lytic transglycosylase/C40 family peptidase | - |
| ETA10_RS21560 (ETA10_21560) | - | 4011672..4014119 (-) | 2448 | WP_119900031.1 | CD3337/EF1877 family mobilome membrane protein | - |
| ETA10_RS21565 (ETA10_21565) | yddF | 4014123..4014449 (-) | 327 | WP_019716380.1 | YddF family protein | - |
| ETA10_RS21570 (ETA10_21570) | conE | 4014467..4016962 (-) | 2496 | WP_119900033.1 | VirB4-like ATPase ConE | - |
| ETA10_RS21575 (ETA10_21575) | conD | 4016850..4017374 (-) | 525 | WP_119900035.1 | conjugal transfer protein | - |
| ETA10_RS21580 (ETA10_21580) | - | 4017387..4017635 (-) | 249 | WP_119900037.1 | hypothetical protein | - |
| ETA10_RS21585 (ETA10_21585) | conB | 4017647..4018711 (-) | 1065 | WP_119900038.1 | conjugal transfer protein | - |
| ETA10_RS22375 | - | 4018729..4018887 (-) | 159 | WP_162920081.1 | hypothetical protein | - |
| ETA10_RS21590 (ETA10_21590) | - | 4018905..4019183 (-) | 279 | WP_044430163.1 | hypothetical protein | - |
| ETA10_RS21595 (ETA10_21595) | - | 4019200..4019466 (-) | 267 | WP_119900040.1 | hypothetical protein | - |
| ETA10_RS21600 (ETA10_21600) | nicK | 4019733..4020791 (-) | 1059 | WP_119900042.1 | DNA relaxase NicK | - |
| ETA10_RS21605 (ETA10_21605) | - | 4020784..4022235 (-) | 1452 | WP_119900044.1 | DNA translocase FtsK | - |
| ETA10_RS21610 (ETA10_21610) | helP | 4022271..4022651 (-) | 381 | WP_119900046.1 | helicase processivity factor HelP | - |
| ETA10_RS21615 (ETA10_21615) | - | 4022668..4022814 (-) | 147 | WP_119900048.1 | hypothetical protein | - |
| ETA10_RS21620 (ETA10_21620) | - | 4023019..4023279 (-) | 261 | WP_119900050.1 | hypothetical protein | - |
| ETA10_RS21625 (ETA10_21625) | - | 4023332..4023592 (-) | 261 | WP_119900052.1 | hypothetical protein | - |
| ETA10_RS21630 (ETA10_21630) | - | 4023589..4023768 (-) | 180 | WP_119900054.1 | ICEBs1 excisionase | - |
| ETA10_RS21635 (ETA10_21635) | - | 4024065..4024448 (+) | 384 | WP_019716391.1 | helix-turn-helix transcriptional regulator | - |
| ETA10_RS21640 (ETA10_21640) | - | 4024445..4024975 (+) | 531 | WP_019716392.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ETA10_RS21645 (ETA10_21645) | - | 4025088..4026284 (-) | 1197 | WP_129110617.1 | Rap family tetratricopeptide repeat protein | - |
| ETA10_RS21650 (ETA10_21650) | - | 4026503..4027270 (+) | 768 | WP_119900058.1 | hypothetical protein | - |
| ETA10_RS21655 (ETA10_21655) | - | 4027287..4028111 (+) | 825 | WP_119900060.1 | hypothetical protein | - |
| ETA10_RS21665 (ETA10_21665) | yyaL | 4028116..4030205 (+) | 2090 | Protein_4192 | thioredoxin domain-containing protein | - |
| ETA10_RS21670 (ETA10_21670) | yyaK | 4030202..4031101 (-) | 900 | WP_032724963.1 | type II CAAX endopeptidase family protein | - |
| ETA10_RS21675 (ETA10_21675) | yyaJ | 4031328..4032683 (+) | 1356 | WP_015250786.1 | MFS transporter | - |
| ETA10_RS21680 (ETA10_21680) | maa | 4032717..4033271 (-) | 555 | WP_046161083.1 | sugar O-acetyltransferase | - |
| ETA10_RS21685 (ETA10_21685) | yyaH | 4033289..4033669 (-) | 381 | WP_003244460.1 | VOC family protein | - |
| ETA10_RS21690 (ETA10_21690) | ccpB | 4033725..4034660 (-) | 936 | WP_046161084.1 | transcriptional regulator CcpB | - |
| ETA10_RS21695 (ETA10_21695) | xth | 4034719..4035477 (-) | 759 | WP_015250782.1 | exodeoxyribonuclease III | - |
| ETA10_RS21700 (ETA10_21700) | rpsR | 4035541..4035780 (-) | 240 | WP_003219224.1 | 30S ribosomal protein S18 | - |
| ETA10_RS21705 (ETA10_21705) | ssbA | 4035824..4036342 (-) | 519 | WP_003219228.1 | single-stranded DNA-binding protein SsbA | Machinery gene |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18742.31 Da Isoelectric Point: 4.7621
>NTDB_id=339979 ETA10_RS21705 WP_003219228.1 4035824..4036342(-) (ssbA) [Bacillus subtilis strain SRCM103773]
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
Nucleotide
Download Length: 519 bp
>NTDB_id=339979 ETA10_RS21705 WP_003219228.1 4035824..4036342(-) (ssbA) [Bacillus subtilis strain SRCM103773]
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.192 |
100 |
0.599 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
61.628 |
0.395 |
| ssb | Glaesserella parasuis strain SC1401 |
35.519 |
100 |
0.378 |