Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ETA10_RS12450 | Genome accession | NZ_CP035397 |
| Coordinates | 2321567..2321902 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM103773 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2316567..2326902
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETA10_RS12430 (ETA10_12430) | gcvT | 2317159..2318247 (-) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ETA10_RS12435 (ETA10_12435) | hepAA | 2318689..2320362 (+) | 1674 | WP_038829735.1 | SNF2-related protein | - |
| ETA10_RS12440 (ETA10_12440) | yqhG | 2320383..2321177 (+) | 795 | WP_014480249.1 | YqhG family protein | - |
| ETA10_RS12445 (ETA10_12445) | sinI | 2321360..2321533 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ETA10_RS12450 (ETA10_12450) | sinR | 2321567..2321902 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ETA10_RS12455 (ETA10_12455) | tasA | 2321995..2322780 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| ETA10_RS12460 (ETA10_12460) | sipW | 2322844..2323416 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| ETA10_RS12465 (ETA10_12465) | tapA | 2323400..2324161 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ETA10_RS12470 (ETA10_12470) | yqzG | 2324433..2324759 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ETA10_RS12475 (ETA10_12475) | spoIITA | 2324801..2324980 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| ETA10_RS12480 (ETA10_12480) | comGG | 2325052..2325426 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ETA10_RS12485 (ETA10_12485) | comGF | 2325427..2325810 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| ETA10_RS12490 (ETA10_12490) | comGE | 2325836..2326183 (-) | 348 | WP_046160583.1 | ComG operon protein 5 | Machinery gene |
| ETA10_RS12495 (ETA10_12495) | comGD | 2326167..2326598 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| ETA10_RS12500 (ETA10_12500) | comGC | 2326588..2326884 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=339942 ETA10_RS12450 WP_003226345.1 2321567..2321902(+) (sinR) [Bacillus subtilis strain SRCM103773]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=339942 ETA10_RS12450 WP_003226345.1 2321567..2321902(+) (sinR) [Bacillus subtilis strain SRCM103773]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |