Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ES968_RS12565 | Genome accession | NZ_CP035395 |
| Coordinates | 2349805..2350875 (-) | Length | 356 a.a. |
| NCBI ID | WP_129134318.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103697 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2344805..2355875
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ES968_RS12520 (ES968_12520) | tapA | 2345283..2346044 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ES968_RS12525 (ES968_12525) | yqzG | 2346316..2346642 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ES968_RS12530 (ES968_12530) | spoIITA | 2346684..2346863 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| ES968_RS12535 (ES968_12535) | comGG | 2346935..2347309 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ES968_RS12540 (ES968_12540) | comGF | 2347310..2347693 (-) | 384 | WP_076458111.1 | ComG operon protein ComGF | Machinery gene |
| ES968_RS12545 (ES968_12545) | comGE | 2347719..2348066 (-) | 348 | WP_087614620.1 | ComG operon protein 5 | Machinery gene |
| ES968_RS12550 (ES968_12550) | comGD | 2348050..2348481 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| ES968_RS12555 (ES968_12555) | comGC | 2348471..2348767 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| ES968_RS12560 (ES968_12560) | comGB | 2348781..2349818 (-) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| ES968_RS12565 (ES968_12565) | comGA | 2349805..2350875 (-) | 1071 | WP_129134318.1 | competence protein ComGA | Machinery gene |
| ES968_RS12570 (ES968_12570) | - | 2351087..2351284 (-) | 198 | WP_129134319.1 | hypothetical protein | - |
| ES968_RS12575 (ES968_12575) | corA | 2351286..2352239 (-) | 954 | WP_129134320.1 | magnesium transporter CorA | - |
| ES968_RS12580 (ES968_12580) | yqhB | 2352382..2353710 (+) | 1329 | WP_129134321.1 | hemolysin family protein | - |
| ES968_RS12585 (ES968_12585) | rsbRD | 2353763..2354599 (-) | 837 | WP_121548936.1 | RsbT co-antagonist protein RsbRD | - |
| ES968_RS12595 (ES968_12595) | mgsR | 2354823..2355203 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| ES968_RS12600 (ES968_12600) | yqgY | 2355435..2355680 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40442.58 Da Isoelectric Point: 9.1529
>NTDB_id=339869 ES968_RS12565 WP_129134318.1 2349805..2350875(-) (comGA) [Bacillus subtilis strain SRCM103697]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEESVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEESVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=339869 ES968_RS12565 WP_129134318.1 2349805..2350875(-) (comGA) [Bacillus subtilis strain SRCM103697]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGAGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGAGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACTAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |
| pilF | Thermus thermophilus HB27 |
36.827 |
99.157 |
0.365 |