Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ES968_RS12560 | Genome accession | NZ_CP035395 |
| Coordinates | 2348781..2349818 (-) | Length | 345 a.a. |
| NCBI ID | WP_044052501.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103697 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2343781..2354818
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ES968_RS12510 (ES968_12510) | tasA | 2343877..2344662 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| ES968_RS12515 (ES968_12515) | sipW | 2344727..2345299 (-) | 573 | WP_129134142.1 | signal peptidase I SipW | - |
| ES968_RS12520 (ES968_12520) | tapA | 2345283..2346044 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ES968_RS12525 (ES968_12525) | yqzG | 2346316..2346642 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ES968_RS12530 (ES968_12530) | spoIITA | 2346684..2346863 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| ES968_RS12535 (ES968_12535) | comGG | 2346935..2347309 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ES968_RS12540 (ES968_12540) | comGF | 2347310..2347693 (-) | 384 | WP_076458111.1 | ComG operon protein ComGF | Machinery gene |
| ES968_RS12545 (ES968_12545) | comGE | 2347719..2348066 (-) | 348 | WP_087614620.1 | ComG operon protein 5 | Machinery gene |
| ES968_RS12550 (ES968_12550) | comGD | 2348050..2348481 (-) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| ES968_RS12555 (ES968_12555) | comGC | 2348471..2348767 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| ES968_RS12560 (ES968_12560) | comGB | 2348781..2349818 (-) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| ES968_RS12565 (ES968_12565) | comGA | 2349805..2350875 (-) | 1071 | WP_129134318.1 | competence protein ComGA | Machinery gene |
| ES968_RS12570 (ES968_12570) | - | 2351087..2351284 (-) | 198 | WP_129134319.1 | hypothetical protein | - |
| ES968_RS12575 (ES968_12575) | corA | 2351286..2352239 (-) | 954 | WP_129134320.1 | magnesium transporter CorA | - |
| ES968_RS12580 (ES968_12580) | yqhB | 2352382..2353710 (+) | 1329 | WP_129134321.1 | hemolysin family protein | - |
| ES968_RS12585 (ES968_12585) | rsbRD | 2353763..2354599 (-) | 837 | WP_121548936.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39746.21 Da Isoelectric Point: 9.6257
>NTDB_id=339868 ES968_RS12560 WP_044052501.1 2348781..2349818(-) (comGB) [Bacillus subtilis strain SRCM103697]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=339868 ES968_RS12560 WP_044052501.1 2348781..2349818(-) (comGB) [Bacillus subtilis strain SRCM103697]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.69 |
93.623 |
0.933 |