Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ES965_RS16395 Genome accession   NZ_CP035391
Coordinates   3122936..3125245 (-) Length   769 a.a.
NCBI ID   WP_129092677.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103689     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3117936..3130245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES965_RS16355 (ES965_16355) mrpB 3118403..3118834 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ES965_RS16360 (ES965_16360) mrpC 3118834..3119175 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  ES965_RS16365 (ES965_16365) mrpD 3119168..3120649 (+) 1482 WP_124059000.1 Na+/H+ antiporter subunit D -
  ES965_RS16370 (ES965_16370) mrpE 3120655..3121131 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ES965_RS16375 (ES965_16375) mrpF 3121131..3121415 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ES965_RS16380 (ES965_16380) mnhG 3121399..3121773 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  ES965_RS16385 (ES965_16385) yuxO 3121812..3122192 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  ES965_RS16390 (ES965_16390) comA 3122211..3122855 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ES965_RS16395 (ES965_16395) comP 3122936..3125245 (-) 2310 WP_129092677.1 two-component system sensor histidine kinase ComP Regulator
  ES965_RS16400 (ES965_16400) comX 3125260..3125427 (-) 168 WP_100505762.1 competence pheromone ComX Regulator
  ES965_RS16405 (ES965_16405) comQ 3125411..3126313 (-) 903 WP_129092678.1 polyprenyl synthetase family protein Regulator
  ES965_RS16410 (ES965_16410) degQ 3126498..3126638 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ES965_RS21865 - 3126860..3126922 (+) 63 Protein_3156 hypothetical protein -
  ES965_RS16415 (ES965_16415) - 3127100..3127468 (+) 369 WP_129092679.1 hypothetical protein -
  ES965_RS16420 (ES965_16420) pdeH 3127444..3128673 (-) 1230 WP_024572553.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89397.11 Da        Isoelectric Point: 8.8918

>NTDB_id=339645 ES965_RS16395 WP_129092677.1 3122936..3125245(-) (comP) [Bacillus subtilis strain SRCM103689]
MKNLIKKFTLAVIVLSILYIFYITYITMNGIIIGTKVLKNDKSQFVIEEISESSYGQFVGLRQGDIILKINEEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRPYSFFLFVLPLVFYFLSIICIFYILKVNKIRRSFAGYILILLLLDISI
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLREIGKAFLNRIHFLYIIPIFNVGIEFFRAYLQVDIDFLATVN
LVSFAILTLFAFSSIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLIFYVLPIIFTGNYVFPALVSASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLFIVGALVWLDVMKIQMNPVRQTVFFFVVMFAVFYFKEVMDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEIGPDWHFYQVEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=339645 ES965_RS16395 WP_129092677.1 3122936..3125245(-) (comP) [Bacillus subtilis strain SRCM103689]
TTGAAGAACTTAATAAAAAAATTCACATTAGCTGTAATTGTGTTGAGCATCCTCTATATATTCTATATAACTTATATAAC
TATGAATGGAATTATTATTGGGACTAAGGTTCTTAAAAATGATAAAAGTCAATTTGTGATAGAAGAAATATCAGAATCTT
CATATGGACAATTTGTTGGTTTGAGACAGGGAGATATCATATTAAAAATTAATGAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTCTGGATATTTTGAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGACCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAGGTAAATAAAATAAGAAGATCATTTGCTGGTTATATTCTTATTCTATTGTTATTAGACATTTCTATT
GCTTATATAAGTGCAGGCGGACCATTTAGAGGACATAGAATCAATCGGTATATTAATTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATCCAAGGATATCTTAGAGAAATAGGAAAAGCTTTTTTGAATAGAATCCATTTTCTTTATA
TCATACCAATATTTAATGTTGGTATTGAGTTTTTCCGAGCCTATTTACAAGTTGATATTGATTTTTTAGCGACTGTTAAC
TTGGTTTCTTTTGCGATATTGACTCTATTTGCTTTTTCGTCGATTTACTTTCATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTATTAATTTTAACAAACACTCTATCATTTGCTCCATTTTTGATATTTTATGTTCTTCCAATAA
TATTTACTGGTAATTATGTTTTCCCTGCATTAGTCTCTGCATCATTACTGGTACTTATTCCGTTTGGTTTAGTGTATCAA
TTTGTAGCGAATAAAATGTTTGATATAGAGTTTATTTTAGGAAGAATGAGATATTACGCTCTACTTGCTATGATACCAAC
TCTATTTATAGTTGGAGCATTAGTTTGGTTAGATGTAATGAAAATTCAGATGAATCCTGTGCGTCAAACTGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATGGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTC
AACTATCAGGACAGTATTTTTAAATATACTCAGCTAATGAGGGGGGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAA
AAATACTATACTGGATGTTTTGCTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAATTGGACCGGACTGGCATTTTTATCAAGTGGAATTTGAAAACGTAACTTCAGAAATCGGGAAAATTATT
GAAGTCAATCAGGGTTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTGTCTTTCTATACAAGTGTGTCCATGGAAAATGTCA
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGGCTGGTCAAGGCGCTGTCGAAGTTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATACCGG
AAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGC
GTAGGATTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

95.319

100

0.953


Multiple sequence alignment