Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EO087_RS15800 Genome accession   NZ_CP035300
Coordinates   3452682..3453044 (+) Length   120 a.a.
NCBI ID   WP_128899996.1    Uniprot ID   A0A410UMU3
Organism   Dyella sp. M7H15-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3447682..3458044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EO087_RS15775 (EO087_15775) - 3448417..3449343 (-) 927 WP_128899692.1 aspartate carbamoyltransferase catalytic subunit -
  EO087_RS15780 (EO087_15780) ruvX 3449436..3449867 (-) 432 WP_128899693.1 Holliday junction resolvase RuvX -
  EO087_RS15785 (EO087_15785) - 3449864..3450433 (-) 570 WP_128899694.1 YqgE/AlgH family protein -
  EO087_RS15790 (EO087_15790) - 3450525..3451385 (-) 861 WP_128899695.1 energy transducer TonB -
  EO087_RS15795 (EO087_15795) gshB 3451382..3452344 (-) 963 WP_128899696.1 glutathione synthase -
  EO087_RS15800 (EO087_15800) pilG 3452682..3453044 (+) 363 WP_128899996.1 response regulator Regulator
  EO087_RS15805 (EO087_15805) - 3453066..3453437 (+) 372 WP_128899697.1 response regulator -
  EO087_RS15810 (EO087_15810) - 3453445..3453987 (+) 543 WP_128899698.1 chemotaxis protein CheW -
  EO087_RS15815 (EO087_15815) - 3454146..3456191 (+) 2046 WP_128899699.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 120 a.a.        Molecular weight: 13405.67 Da        Isoelectric Point: 9.1434

>NTDB_id=339068 EO087_RS15800 WP_128899996.1 3452682..3453044(+) (pilG) [Dyella sp. M7H15-1]
MVIDDSKTIRRTAETLLKKEGCDVLTAIDGFEALAKISDQKPSIIFVDIMMPRLDGYQTCALIKNNPQFRATPVIMLSSK
DGLFDKARGRIVGAEQYLTKPFTRDELLGAIHRHVTVLGR

Nucleotide


Download         Length: 363 bp        

>NTDB_id=339068 EO087_RS15800 WP_128899996.1 3452682..3453044(+) (pilG) [Dyella sp. M7H15-1]
ATGGTTATCGATGACTCCAAGACCATCCGTCGAACGGCGGAAACCTTGTTGAAGAAGGAAGGCTGCGATGTGCTTACCGC
CATCGACGGCTTCGAGGCGCTGGCCAAGATCTCTGACCAGAAGCCGTCGATCATCTTCGTGGATATCATGATGCCGCGGC
TCGACGGTTATCAGACCTGCGCGCTGATCAAGAACAATCCGCAATTCCGGGCCACGCCAGTGATTATGTTGAGTTCGAAA
GATGGTTTGTTCGACAAGGCGCGTGGACGCATCGTCGGCGCCGAGCAATATCTCACCAAGCCGTTCACGCGCGATGAACT
GCTGGGTGCCATCCACCGCCATGTCACGGTTTTAGGCCGGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A410UMU3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.276

96.667

0.708
  vicR Streptococcus mutans UA159

41.739

95.833

0.4
  pilH Synechocystis sp. PCC 6803

40.708

94.167

0.383
  chiS Vibrio cholerae strain A1552

37.931

96.667

0.367

Multiple sequence alignment