Detailed information
Bioinformatically predicted
Overview
| Name | comFC/cflB | Type | Machinery gene |
| Locus tag | SSUST3_RS02360 | Genome accession | NC_015433 |
| Coordinates | 447243..447908 (+) | Length | 221 a.a. |
| NCBI ID | WP_004194119.1 | Uniprot ID | A0A0H3MTI6 |
| Organism | Streptococcus suis ST3 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 442243..452908
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUST3_RS02340 | - | 443331..443564 (+) | 234 | WP_022540567.1 | hypothetical protein | - |
| SSUST3_RS02345 (SSUST3_0459) | - | 444265..444471 (-) | 207 | WP_041179173.1 | DUF1492 domain-containing protein | - |
| SSUST3_RS02350 (SSUST3_0460) | - | 445269..445901 (-) | 633 | WP_004194123.1 | YigZ family protein | - |
| SSUST3_RS02355 (SSUST3_0461) | comFA/cflA | 445958..447250 (+) | 1293 | WP_004194121.1 | DEAD/DEAH box helicase | Machinery gene |
| SSUST3_RS02360 (SSUST3_0462) | comFC/cflB | 447243..447908 (+) | 666 | WP_004194119.1 | ComF family protein | Machinery gene |
| SSUST3_RS02365 (SSUST3_0463) | hpf | 447985..448527 (+) | 543 | WP_004194117.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 25748.55 Da Isoelectric Point: 8.2726
>NTDB_id=33895 SSUST3_RS02360 WP_004194119.1 447243..447908(+) (comFC/cflB) [Streptococcus suis ST3]
MSNCLLCGQAMKNKTRFSDLIFFSKEKSGICEECFSTFEEIAEQHCPHCYKNGESESCKDCQYWQNQGKPVVHTALYQYN
QAMAHYFSRYKFQGDYVLRNIFAKKLRIALSQFPDYTIVPIPISQKRLSERGFNQVEGLLDATNIPYQSLLGKYESQKQS
SKNRAERLEAKQMFYLLDEKEVPEKILLFDDIYTTGATIQLAVELFMKIGRKEIKTFSLTR
MSNCLLCGQAMKNKTRFSDLIFFSKEKSGICEECFSTFEEIAEQHCPHCYKNGESESCKDCQYWQNQGKPVVHTALYQYN
QAMAHYFSRYKFQGDYVLRNIFAKKLRIALSQFPDYTIVPIPISQKRLSERGFNQVEGLLDATNIPYQSLLGKYESQKQS
SKNRAERLEAKQMFYLLDEKEVPEKILLFDDIYTTGATIQLAVELFMKIGRKEIKTFSLTR
Nucleotide
Download Length: 666 bp
>NTDB_id=33895 SSUST3_RS02360 WP_004194119.1 447243..447908(+) (comFC/cflB) [Streptococcus suis ST3]
ATGTCTAATTGTCTATTGTGCGGTCAAGCTATGAAAAATAAAACAAGATTTTCAGATCTCATCTTCTTTAGTAAAGAAAA
ATCGGGCATCTGTGAAGAATGTTTTTCGACTTTTGAGGAAATAGCAGAGCAACACTGTCCACATTGTTATAAAAATGGAG
AATCGGAAAGTTGCAAGGATTGTCAGTACTGGCAGAATCAAGGGAAACCAGTTGTCCACACAGCTTTGTACCAATATAAT
CAAGCGATGGCACATTATTTTAGTCGCTACAAATTTCAAGGAGACTATGTTTTAAGAAATATTTTTGCTAAAAAGCTTAG
AATAGCGTTAAGCCAATTTCCTGACTACACAATTGTTCCCATACCAATTAGTCAAAAACGACTATCAGAACGCGGTTTTA
ATCAAGTGGAAGGACTTTTGGATGCTACAAATATTCCTTATCAGTCCCTTCTTGGAAAGTATGAAAGCCAAAAACAATCA
TCTAAAAATCGTGCAGAGAGACTAGAAGCAAAACAGATGTTCTATCTATTAGATGAAAAAGAAGTGCCAGAAAAAATATT
ATTATTCGACGATATATATACAACAGGAGCCACAATCCAACTTGCTGTAGAACTTTTCATGAAAATTGGTAGGAAAGAAA
TCAAAACATTTTCACTAACACGATAA
ATGTCTAATTGTCTATTGTGCGGTCAAGCTATGAAAAATAAAACAAGATTTTCAGATCTCATCTTCTTTAGTAAAGAAAA
ATCGGGCATCTGTGAAGAATGTTTTTCGACTTTTGAGGAAATAGCAGAGCAACACTGTCCACATTGTTATAAAAATGGAG
AATCGGAAAGTTGCAAGGATTGTCAGTACTGGCAGAATCAAGGGAAACCAGTTGTCCACACAGCTTTGTACCAATATAAT
CAAGCGATGGCACATTATTTTAGTCGCTACAAATTTCAAGGAGACTATGTTTTAAGAAATATTTTTGCTAAAAAGCTTAG
AATAGCGTTAAGCCAATTTCCTGACTACACAATTGTTCCCATACCAATTAGTCAAAAACGACTATCAGAACGCGGTTTTA
ATCAAGTGGAAGGACTTTTGGATGCTACAAATATTCCTTATCAGTCCCTTCTTGGAAAGTATGAAAGCCAAAAACAATCA
TCTAAAAATCGTGCAGAGAGACTAGAAGCAAAACAGATGTTCTATCTATTAGATGAAAAAGAAGTGCCAGAAAAAATATT
ATTATTCGACGATATATATACAACAGGAGCCACAATCCAACTTGCTGTAGAACTTTTCATGAAAATTGGTAGGAAAGAAA
TCAAAACATTTTCACTAACACGATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC/cflB | Streptococcus mitis SK321 |
49.083 |
98.643 |
0.484 |
| comFC/cflB | Streptococcus pneumoniae TIGR4 |
49.083 |
98.643 |
0.484 |
| comFC/cflB | Streptococcus pneumoniae Rx1 |
49.083 |
98.643 |
0.484 |
| comFC/cflB | Streptococcus pneumoniae D39 |
49.083 |
98.643 |
0.484 |
| comFC/cflB | Streptococcus pneumoniae R6 |
49.083 |
98.643 |
0.484 |
| comFC/cflB | Streptococcus mitis NCTC 12261 |
49.083 |
98.643 |
0.484 |