Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F0T11_RS03025 | Genome accession | NZ_CP043816 |
| Coordinates | 565711..566235 (+) | Length | 174 a.a. |
| NCBI ID | WP_003688219.1 | Uniprot ID | B4RKU5 |
| Organism | Neisseria gonorrhoeae strain NG251 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 560711..571235
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F0T11_RS02985 | - | 561028..561204 (+) | 177 | WP_164823803.1 | hypothetical protein | - |
| F0T11_RS02990 (F0T11_03335) | - | 561125..561925 (+) | 801 | Protein_587 | opacity family porin | - |
| F0T11_RS12345 | - | 561939..562298 (+) | 360 | WP_237082002.1 | hypothetical protein | - |
| F0T11_RS03000 (F0T11_03350) | - | 562295..562785 (+) | 491 | Protein_589 | REP-associated tyrosine transposase | - |
| F0T11_RS03005 (F0T11_03355) | - | 562822..563088 (+) | 267 | Protein_590 | transposase | - |
| F0T11_RS03015 (F0T11_03370) | - | 563590..564213 (+) | 624 | WP_003688215.1 | lytic transglycosylase domain-containing protein | - |
| F0T11_RS03020 (F0T11_03375) | - | 564325..565707 (+) | 1383 | WP_003698298.1 | MFS transporter | - |
| F0T11_RS03025 (F0T11_03380) | ssb | 565711..566235 (+) | 525 | WP_003688219.1 | single-stranded DNA-binding protein | Machinery gene |
| F0T11_RS03030 (F0T11_03385) | - | 566608..567531 (+) | 924 | WP_025455877.1 | DMT family transporter | - |
| F0T11_RS03035 (F0T11_03390) | fumC | 567596..568984 (-) | 1389 | WP_003695070.1 | class II fumarate hydratase | - |
| F0T11_RS03040 (F0T11_03395) | recP/tkt | 569128..571107 (-) | 1980 | WP_003688227.1 | transketolase | Machinery gene |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19475.68 Da Isoelectric Point: 5.8313
>NTDB_id=338831 F0T11_RS03025 WP_003688219.1 565711..566235(+) (ssb) [Neisseria gonorrhoeae strain NG251]
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQNQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQNQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=338831 F0T11_RS03025 WP_003688219.1 565711..566235(+) (ssb) [Neisseria gonorrhoeae strain NG251]
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAATCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAATCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria gonorrhoeae MS11 |
99.425 |
100 |
0.994 |
| ssb | Neisseria meningitidis MC58 |
98.276 |
100 |
0.983 |
| ssb | Vibrio cholerae strain A1552 |
47.486 |
100 |
0.489 |
| ssb | Glaesserella parasuis strain SC1401 |
43.889 |
100 |
0.454 |