Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | EQH17_RS00110 | Genome accession | NZ_CP035263 |
| Coordinates | 22154..22390 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain TVO_1901922 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 17154..27390
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH17_RS00100 (EQH17_00100) | - | 20224..21070 (+) | 847 | Protein_14 | IS630 family transposase | - |
| EQH17_RS00105 (EQH17_00105) | - | 21105..21889 (-) | 785 | Protein_15 | transposase | - |
| EQH17_RS00110 (EQH17_00110) | comW | 22154..22390 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| EQH17_RS00115 (EQH17_00115) | - | 22621..23907 (+) | 1287 | WP_001813655.1 | adenylosuccinate synthase | - |
| EQH17_RS00120 (EQH17_00120) | tadA | 24108..24575 (+) | 468 | WP_000291872.1 | tRNA adenosine(34) deaminase TadA | - |
| EQH17_RS00130 (EQH17_00130) | - | 24761..25204 (+) | 444 | WP_000701992.1 | dUTP diphosphatase | - |
| EQH17_RS00135 (EQH17_00135) | - | 25206..25721 (+) | 516 | WP_001828232.1 | histidine phosphatase family protein | - |
| EQH17_RS00140 (EQH17_00140) | radA | 25735..27096 (+) | 1362 | WP_073176637.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=338512 EQH17_RS00110 WP_000939545.1 22154..22390(+) (comW) [Streptococcus pneumoniae strain TVO_1901922]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=338512 EQH17_RS00110 WP_000939545.1 22154..22390(+) (comW) [Streptococcus pneumoniae strain TVO_1901922]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |