Detailed information NTG0338301

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQH20_RS04300
• Genome accession: NZ_CP035260
• Coordinates: 866304..867257 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495922.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901925
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 861304..872257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH20_RS04275 (EQH20_04515)	rpmG	862047..862196 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
EQH20_RS04280 (EQH20_04520)	secG	862236..862469 (+)	234	WP_020902907.1	preprotein translocase subunit SecG	-
EQH20_RS04285 (EQH20_04525)	rnr	862571..864925 (+)	2355	WP_061647497.1	ribonuclease R	-
EQH20_RS04290 (EQH20_04530)	smpB	864888..865355 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
EQH20_RS04295 (EQH20_04535)	tehB	865371..866231 (+)	861	WP_000413761.1	SAM-dependent methyltransferase TehB	-
EQH20_RS04300 (EQH20_04540)	coiA	866304..867257 (+)	954	WP_000495922.1	competence protein CoiA	Machinery gene
EQH20_RS04305 (EQH20_04545)	pepF	867276..869078 (+)	1803	WP_000244144.1	oligoendopeptidase F	Regulator
EQH20_RS04310 (EQH20_04550)	-	869080..869793 (+)	714	WP_000230401.1	O-methyltransferase	-
EQH20_RS04315 (EQH20_04555)	prsA	869860..870801 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
EQH20_RS04320 (EQH20_04560)	-	870920..871261 (-)	342	Protein_861	transposase	-
EQH20_RS04325 (EQH20_04570)	-	871675..871770 (+)	96	Protein_862	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38278.91 Da
• Isoelectric Point: 9.1156

>NTDB_id=338301 EQH20_RS04300 WP_000495922.1 866304..867257(+) (coiA) [Streptococcus pneumoniae strain TVO_1901925]
MFVARDTRGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=338301 EQH20_RS04300 WP_000495922.1 866304..867257(+) (coiA) [Streptococcus pneumoniae strain TVO_1901925]
ATGTTTGTTGCGAGAGATACTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTGTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATTCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCGGAACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	98.423	100	0.984
coiA	Streptococcus pneumoniae Rx1	97.792	100	0.978
coiA	Streptococcus pneumoniae D39	97.792	100	0.978
coiA	Streptococcus pneumoniae R6	97.792	100	0.978
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432