Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | FTN78_RS08380 | Genome accession | NZ_CP043523 |
| Coordinates | 1637419..1638015 (-) | Length | 198 a.a. |
| NCBI ID | WP_003131648.1 | Uniprot ID | Q9CIL6 |
| Organism | Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1632419..1643015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FTN78_RS08365 (FTN78_chr1663) | - | 1633034..1634686 (-) | 1653 | WP_003131645.1 | peptide ABC transporter substrate-binding protein | - |
| FTN78_RS08370 (FTN78_chr1664) | murF | 1634856..1636178 (-) | 1323 | WP_010905294.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| FTN78_RS08375 (FTN78_chr1665) | - | 1636253..1637302 (-) | 1050 | WP_010905293.1 | D-alanine--D-alanine ligase | - |
| FTN78_RS08380 (FTN78_chr1666) | recR | 1637419..1638015 (-) | 597 | WP_003131648.1 | recombination mediator RecR | Machinery gene |
| FTN78_RS08385 (FTN78_chr1667) | - | 1638154..1640319 (-) | 2166 | WP_003131649.1 | penicillin-binding transpeptidase domain-containing protein | - |
| FTN78_RS08390 (FTN78_chr1668) | ahpF | 1640485..1642014 (-) | 1530 | WP_150891156.1 | alkyl hydroperoxide reductase subunit F | - |
| FTN78_RS08395 (FTN78_chr1669) | ahpC | 1642081..1642644 (-) | 564 | WP_003131651.1 | alkyl hydroperoxide reductase subunit C | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21909.22 Da Isoelectric Point: 4.8226
>NTDB_id=338048 FTN78_RS08380 WP_003131648.1 1637419..1638015(-) (recR) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
Nucleotide
Download Length: 597 bp
>NTDB_id=338048 FTN78_RS08380 WP_003131648.1 1637419..1638015(-) (recR) [Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96]
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTTTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGTGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGACCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGTACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATCATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGCTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTTTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGTGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGACCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGTACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATCATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGCTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
78.283 |
100 |
0.783 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
59.596 |
100 |
0.596 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |