Detailed information NTG0337907

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQH26_RS04750
• Genome accession: NZ_CP035254
• Coordinates: 935955..936908 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495895.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901932
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 930955..941908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH26_RS04725 (EQH26_05035)	rpmG	931698..931847 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
EQH26_RS04730 (EQH26_05040)	secG	931887..932120 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EQH26_RS04735 (EQH26_05045)	rnr	932222..934576 (+)	2355	WP_000654896.1	ribonuclease R	-
EQH26_RS04740 (EQH26_05050)	smpB	934539..935006 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
EQH26_RS04745 (EQH26_05055)	tehB	935022..935882 (+)	861	WP_000413766.1	SAM-dependent methyltransferase TehB	-
EQH26_RS04750 (EQH26_05060)	coiA	935955..936908 (+)	954	WP_000495895.1	competence protein CoiA	Machinery gene
EQH26_RS04755 (EQH26_05065)	pepF	936927..938729 (+)	1803	WP_000244138.1	oligoendopeptidase F	Regulator
EQH26_RS04760 (EQH26_05070)	-	938731..939444 (+)	714	WP_016397920.1	O-methyltransferase	-
EQH26_RS04765 (EQH26_05075)	prsA	939511..940452 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
EQH26_RS04770 (EQH26_05080)	-	940571..940912 (-)	342	Protein_956	transposase	-
EQH26_RS04775 (EQH26_05090)	-	941325..941420 (+)	96	Protein_957	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38233.91 Da
• Isoelectric Point: 9.3239

>NTDB_id=337907 EQH26_RS04750 WP_000495895.1 935955..936908(+) (coiA) [Streptococcus pneumoniae strain TVO_1901932]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLSRLQQGFLYFSQNMGF
YVWELDKKKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=337907 EQH26_RS04750 WP_000495895.1 935955..936908(+) (coiA) [Streptococcus pneumoniae strain TVO_1901932]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGAGTCGTCTACAGCAAGGTTTTCTGTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGAAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATTCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCGGAACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	98.107	100	0.981
coiA	Streptococcus pneumoniae Rx1	97.792	100	0.978
coiA	Streptococcus pneumoniae D39	97.792	100	0.978
coiA	Streptococcus pneumoniae R6	97.792	100	0.978
coiA	Streptococcus mitis NCTC 12261	88.013	100	0.88
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429