Detailed information NTG0337824

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQH28_RS04470
• Genome accession: NZ_CP035252
• Coordinates: 889017..889970 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495900.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901934
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 884017..894970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH28_RS04445 (EQH28_04760)	rpmG	884760..884909 (+)	150	WP_032496114.1	50S ribosomal protein L33	-
EQH28_RS04450 (EQH28_04765)	secG	884949..885182 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EQH28_RS04455 (EQH28_04770)	rnr	885284..887638 (+)	2355	WP_000654912.1	ribonuclease R	-
EQH28_RS04460 (EQH28_04775)	smpB	887601..888068 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
EQH28_RS04465 (EQH28_04780)	tehB	888084..888944 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
EQH28_RS04470 (EQH28_04785)	coiA	889017..889970 (+)	954	WP_000495900.1	competence protein CoiA	Machinery gene
EQH28_RS04475 (EQH28_04790)	pepF	889989..891791 (+)	1803	WP_000244122.1	oligoendopeptidase F	Regulator
EQH28_RS04480 (EQH28_04795)	-	891793..892506 (+)	714	WP_000230399.1	O-methyltransferase	-
EQH28_RS04485 (EQH28_04800)	prsA	892573..893514 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
EQH28_RS04490 (EQH28_04805)	-	893631..893972 (-)	342	Protein_898	transposase	-
EQH28_RS04495 (EQH28_04815)	-	894386..894481 (+)	96	Protein_899	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=337824 EQH28_RS04470 WP_000495900.1 889017..889970(+) (coiA) [Streptococcus pneumoniae strain TVO_1901934]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=337824 EQH28_RS04470 WP_000495900.1 889017..889970(+) (coiA) [Streptococcus pneumoniae strain TVO_1901934]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432