Detailed information NTG0337587

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQH32_RS04620
• Genome accession: NZ_CP035248
• Coordinates: 907984..908937 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495906.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901939
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 902984..913937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH32_RS04595 (EQH32_04840)	rpmG	903727..903876 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
EQH32_RS04600 (EQH32_04845)	secG	903916..904149 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EQH32_RS04605 (EQH32_04850)	rnr	904251..906605 (+)	2355	WP_000654916.1	ribonuclease R	-
EQH32_RS04610 (EQH32_04855)	smpB	906568..907035 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
EQH32_RS04615 (EQH32_04860)	tehB	907051..907911 (+)	861	WP_000413772.1	SAM-dependent methyltransferase TehB	-
EQH32_RS04620 (EQH32_04865)	coiA	907984..908937 (+)	954	WP_000495906.1	competence protein CoiA	Machinery gene
EQH32_RS04625 (EQH32_04870)	pepF	908956..910758 (+)	1803	WP_000244156.1	oligoendopeptidase F	Regulator
EQH32_RS04630 (EQH32_04875)	-	910760..911473 (+)	714	WP_000230402.1	O-methyltransferase	-
EQH32_RS04635 (EQH32_04880)	prsA	911540..912481 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
EQH32_RS04640 (EQH32_04885)	-	912598..912939 (-)	342	Protein_928	transposase	-
EQH32_RS04645 (EQH32_04895)	-	913352..913447 (+)	96	Protein_929	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38215.85 Da
• Isoelectric Point: 8.9845

>NTDB_id=337587 EQH32_RS04620 WP_000495906.1 907984..908937(+) (coiA) [Streptococcus pneumoniae strain TVO_1901939]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKKQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=337587 EQH32_RS04620 WP_000495906.1 907984..908937(+) (coiA) [Streptococcus pneumoniae strain TVO_1901939]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAAACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.685	100	0.997
coiA	Streptococcus pneumoniae D39	99.685	100	0.997
coiA	Streptococcus pneumoniae R6	99.685	100	0.997
coiA	Streptococcus mitis NCTC 12261	89.59	100	0.896
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435