Detailed information NTG0337280

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQH36_RS04490
• Genome accession: NZ_CP035244
• Coordinates: 888189..889142 (+)
• Length: 317 a.a.
• NCBI ID: WP_061758484.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901945
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 883189..894142

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH36_RS04465 (EQH36_04715)	rpmG	883932..884081 (+)	150	WP_001809104.1	50S ribosomal protein L33	-
EQH36_RS04470 (EQH36_04720)	secG	884121..884354 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EQH36_RS04475 (EQH36_04725)	rnr	884456..886810 (+)	2355	WP_054363463.1	ribonuclease R	-
EQH36_RS04480 (EQH36_04730)	smpB	886773..887240 (+)	468	WP_001051753.1	SsrA-binding protein SmpB	-
EQH36_RS04485 (EQH36_04735)	tehB	887256..888116 (+)	861	WP_000413758.1	SAM-dependent methyltransferase TehB	-
EQH36_RS04490 (EQH36_04740)	coiA	888189..889142 (+)	954	WP_061758484.1	competence protein CoiA	Machinery gene
EQH36_RS04495 (EQH36_04745)	pepF	889161..890963 (+)	1803	WP_000244134.1	oligoendopeptidase F	Regulator
EQH36_RS04500 (EQH36_04750)	-	890965..891678 (+)	714	WP_078152034.1	O-methyltransferase	-
EQH36_RS04505 (EQH36_04755)	prsA	891745..892686 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
EQH36_RS04510 (EQH36_04760)	-	892803..892889 (-)	87	Protein_910	IS3 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38205.77 Da
• Isoelectric Point: 8.8381

>NTDB_id=337280 EQH36_RS04490 WP_061758484.1 888189..889142(+) (coiA) [Streptococcus pneumoniae strain TVO_1901945]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLSYKRQKISHFTVSEDKDICRYIQQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=337280 EQH36_RS04490 WP_061758484.1 888189..889142(+) (coiA) [Streptococcus pneumoniae strain TVO_1901945]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTTCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCAGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.369	100	0.994
coiA	Streptococcus pneumoniae Rx1	98.738	100	0.987
coiA	Streptococcus pneumoniae D39	98.738	100	0.987
coiA	Streptococcus pneumoniae R6	98.738	100	0.987
coiA	Streptococcus mitis NCTC 12261	88.644	100	0.886
coiA	Lactococcus lactis subsp. cremoris KW2	41.975	100	0.429