Detailed information NTG0336663

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: EQH45_RS05900
• Genome accession: NZ_CP035235
• Coordinates: 1182486..1183439 (-)
• Length: 317 a.a.
• NCBI ID: WP_000495907.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902276
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1177486..1188439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH45_RS05880 (EQH45_06175)	-	1178739..1178825 (+)	87	Protein_1183	IS3 family transposase	-
EQH45_RS05885 (EQH45_06180)	prsA	1178942..1179883 (-)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
EQH45_RS05890 (EQH45_06185)	-	1179950..1180663 (-)	714	WP_078152034.1	O-methyltransferase	-
EQH45_RS05895 (EQH45_06190)	pepF	1180665..1182467 (-)	1803	WP_000244134.1	oligoendopeptidase F	Regulator
EQH45_RS05900 (EQH45_06195)	coiA	1182486..1183439 (-)	954	WP_000495907.1	competence protein CoiA	Machinery gene
EQH45_RS05905 (EQH45_06200)	tehB	1183512..1184372 (-)	861	WP_000413758.1	SAM-dependent methyltransferase TehB	-
EQH45_RS05910 (EQH45_06205)	smpB	1184388..1184855 (-)	468	WP_001051753.1	SsrA-binding protein SmpB	-
EQH45_RS05915 (EQH45_06210)	rnr	1184818..1187172 (-)	2355	WP_000654881.1	ribonuclease R	-
EQH45_RS05920 (EQH45_06215)	secG	1187274..1187507 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
EQH45_RS05925 (EQH45_06220)	rpmG	1187547..1187696 (-)	150	WP_001810029.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38215.81 Da
• Isoelectric Point: 8.8381

>NTDB_id=336663 EQH45_RS05900 WP_000495907.1 1182486..1183439(-) (coiA) [Streptococcus pneumoniae strain TVO_1902276]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIQQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=336663 EQH45_RS05900 WP_000495907.1 1182486..1183439(-) (coiA) [Streptococcus pneumoniae strain TVO_1902276]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCAGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.284	100	0.432