Detailed information NTG0033659

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: SGGBAA2069_RS11075
• Genome accession: NC_015215
• Coordinates: 2233180..2234178 (-)
• Length: 332 a.a.
• NCBI ID: WP_009855156.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2228180..2239178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGGBAA2069_RS11065 (SGGBAA2069_c21760)	-	2229040..2231016 (-)	1977	WP_009855154.1	Cna B-type domain-containing protein	-
SGGBAA2069_RS11070 (SGGBAA2069_c21770)	-	2231608..2232210 (+)	603	WP_009855155.1	TetR/AcrR family transcriptional regulator	-
SGGBAA2069_RS11075 (SGGBAA2069_c21780)	ruvB	2233180..2234178 (-)	999	WP_009855156.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
SGGBAA2069_RS11080 (SGGBAA2069_c21790)	nrdG	2234676..2235290 (-)	615	WP_003066866.1	anaerobic ribonucleoside-triphosphate reductase activating protein	-
SGGBAA2069_RS11085 (SGGBAA2069_c21800)	-	2235332..2235838 (-)	507	WP_009855158.1	GNAT family N-acetyltransferase	-
SGGBAA2069_RS12210 (SGGBAA2069_c21810)	-	2235850..2235996 (-)	147	WP_012962621.1	hypothetical protein	-
SGGBAA2069_RS11090 (SGGBAA2069_c21820)	nrdD	2236236..2238452 (-)	2217	WP_012962622.1	anaerobic ribonucleoside-triphosphate reductase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37479.90 Da
• Isoelectric Point: 4.5455

>NTDB_id=33659 SGGBAA2069_RS11075 WP_009855156.1 2233180..2234178(-) (ruvB) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MSRILDNDIMGDEEFAERTLRPQFLKEYIGQDKVKNQLKIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRMPMAVEEVLYSAMEDFYIDIMIGNGETSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYDVEDLTEIVERTADIFEMEIVHEAAQELARRSRGTPRIANRLLKRVRDYAQIMGDGIIT
KDITDKALTMLDVDHEGLDYIDQKILRTMIEVYNGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFIMRTRTGRVATEK
AYEHLGYPYSEK

Nucleotide

• Length: 999 bp

>NTDB_id=33659 SGGBAA2069_RS11075 WP_009855156.1 2233180..2234178(-) (ruvB) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
ATGAGCAGAATTTTAGATAATGATATTATGGGTGATGAGGAATTTGCGGAGCGCACGCTTCGTCCTCAGTTTTTAAAAGA
ATATATCGGACAAGATAAGGTTAAAAATCAGCTAAAAATCTTTATTGAGGCAGCAAAATTACGTGATGAGTCCTTGGACC
ATGTGCTATTGTTTGGGCCTCCTGGTCTTGGTAAAACGACAATGGCATTTGTGATTGCTAATGAATTAGGGGTGAATTTA
AAACAGACATCTGGACCTGCTATCGAAAAAGCTGGTGATTTGGTTGCTATCTTGAATGATTTGGAACCTGGTGATGTGCT
TTTTATTGACGAAATTCATCGTATGCCAATGGCTGTGGAAGAAGTGCTTTATAGCGCCATGGAAGATTTTTATATTGACA
TCATGATTGGCAATGGCGAGACTAGTCGTAGTGTTCACTTGGATTTACCACCGTTTACCTTGATTGGTGCGACAACACGT
GCTGGTATGCTTTCTAATCCTTTACGTGCTCGTTTTGGCATTACTGGGCATATGGAATACTATGACGTTGAAGATTTGAC
AGAAATTGTTGAACGCACGGCAGATATTTTTGAAATGGAAATTGTCCATGAAGCTGCCCAAGAATTGGCACGACGTAGTC
GTGGAACACCTCGTATTGCTAATCGTCTCTTAAAACGTGTACGTGATTACGCCCAAATTATGGGAGATGGTATTATCACA
AAAGATATTACCGATAAAGCATTGACGATGTTAGATGTTGACCATGAGGGACTTGATTACATTGACCAGAAAATCTTGCG
TACCATGATTGAGGTTTATAACGGTGGTCCTGTCGGTTTAGGAACGCTATCCGTTAATATCGCTGAAGAGCGTGATACTG
TTGAGGATATGTATGAGCCGTATTTGATTCAAAAAGGCTTTATTATGCGCACCCGTACTGGTCGTGTGGCAACTGAAAAA
GCTTATGAACATTTGGGCTATCCTTATTCGGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	89.458	100	0.895
ruvB	Streptococcus pneumoniae R6	89.458	100	0.895
ruvB	Streptococcus pneumoniae D39	89.458	100	0.895
ruvB	Bacillus subtilis subsp. subtilis str. 168	61.92	97.289	0.602
ruvB	Helicobacter pylori 26695	50	98.193	0.491
ruvB	Synechocystis sp. PCC 6803	49.84	94.277	0.47