Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   EQW70_RS19085 Genome accession   NZ_CP035226
Coordinates   3615616..3616773 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain SRCM103517     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3610616..3621773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS19055 (EQW70_19055) yvyF 3610867..3611286 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  EQW70_RS19060 (EQW70_19060) comFC 3611360..3612082 (-) 723 WP_124047882.1 comF operon protein ComFC Machinery gene
  EQW70_RS19065 (EQW70_19065) comFB 3612046..3612342 (-) 297 WP_003227989.1 late competence protein ComFB -
  EQW70_RS19070 (EQW70_19070) comFA 3612402..3613793 (-) 1392 WP_128740769.1 ATP-dependent helicase ComFA Machinery gene
  EQW70_RS19075 (EQW70_19075) fakBA 3613901..3614746 (-) 846 WP_003227986.1 DegV family protein -
  EQW70_RS19080 (EQW70_19080) degU 3614844..3615533 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  EQW70_RS19085 (EQW70_19085) degS 3615616..3616773 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  EQW70_RS19090 (EQW70_19090) yvyE 3616990..3617643 (+) 654 WP_003227979.1 YigZ family protein -
  EQW70_RS19095 (EQW70_19095) tagV 3617643..3618818 (+) 1176 WP_103803401.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  EQW70_RS19100 (EQW70_19100) tagO 3618891..3619967 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  EQW70_RS19105 (EQW70_19105) tuaH 3620112..3621305 (-) 1194 WP_103803439.1 glycosyltransferase family 1 protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=336249 EQW70_RS19085 WP_003227983.1 3615616..3616773(-) (degS) [Bacillus subtilis strain SRCM103517]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=336249 EQW70_RS19085 WP_003227983.1 3615616..3616773(-) (degS) [Bacillus subtilis strain SRCM103517]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTAAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGGTCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment