Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | SGGBAA2069_RS03440 | Genome accession | NC_015215 |
| Coordinates | 650022..650993 (+) | Length | 323 a.a. |
| NCBI ID | WP_009853776.1 | Uniprot ID | - |
| Organism | Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 645022..655993
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGGBAA2069_RS03410 (SGGBAA2069_c06140) | sodA | 645122..645730 (+) | 609 | WP_014619989.1 | superoxide dismutase SodA | - |
| SGGBAA2069_RS03415 (SGGBAA2069_c06150) | - | 645882..646607 (+) | 726 | WP_012961667.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| SGGBAA2069_RS03420 (SGGBAA2069_c06160) | queA | 646639..647667 (-) | 1029 | WP_009853772.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| SGGBAA2069_RS03425 (SGGBAA2069_c06170) | - | 647843..648343 (+) | 501 | WP_009853773.1 | VIT1/CCC1 transporter family protein | - |
| SGGBAA2069_RS03430 (SGGBAA2069_c06180) | nagB | 648472..649176 (+) | 705 | WP_013642867.1 | glucosamine-6-phosphate deaminase | - |
| SGGBAA2069_RS03435 (SGGBAA2069_c06190) | - | 649252..649968 (+) | 717 | WP_009853775.1 | pseudouridine synthase | - |
| SGGBAA2069_RS03440 (SGGBAA2069_c06200) | coiA | 650022..650993 (+) | 972 | WP_009853776.1 | competence protein CoiA | Machinery gene |
| SGGBAA2069_RS03445 (SGGBAA2069_c06210) | pepF | 650983..652785 (+) | 1803 | WP_009853777.1 | oligoendopeptidase F | Regulator |
| SGGBAA2069_RS03450 (SGGBAA2069_c06220) | - | 652859..653377 (+) | 519 | WP_009853778.1 | GNAT family N-acetyltransferase | - |
| SGGBAA2069_RS03455 (SGGBAA2069_c06230) | - | 653399..654010 (+) | 612 | WP_013642868.1 | HAD-IA family hydrolase | - |
| SGGBAA2069_RS03460 (SGGBAA2069_c06240) | - | 654064..654765 (+) | 702 | WP_009853780.1 | O-methyltransferase | - |
| SGGBAA2069_RS03465 (SGGBAA2069_c06250) | - | 654834..655940 (+) | 1107 | WP_009853781.1 | peptidyl-prolyl cis-trans isomerase | - |
Sequence
Protein
Download Length: 323 a.a. Molecular weight: 38007.45 Da Isoelectric Point: 7.5010
>NTDB_id=33605 SGGBAA2069_RS03440 WP_009853776.1 650022..650993(+) (coiA) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
MLSALDENGKLVSLLDAIPANQNFVCPACHSAVRLKNGKVMRPHFAHVSLDKCDFYSENESSEHLQLKAALYHAVSRTEQ
VVVEKVLPDLHQVADLFVNDNLALEVQCSRLSEQRLFQRTKAYQSHGIQVLWLLGEKLWLGNRLSPLQRHFLYFSQNMGF
HLWELDVTKQLIRLHYLIYEDLHGKIHYLTKTCSFSDDIMAFFRLPYRQQKLSTYEVNQDQTLLTYIQKQLSSRHSIWLK
RQEEAYLQGKNLLSLPLSAYFPQVRPFDFAEGFCQISQDLSPFYENFHCFYQNQTEKERQWLYPPAYYDKMVNKPQKGEC
DVR
MLSALDENGKLVSLLDAIPANQNFVCPACHSAVRLKNGKVMRPHFAHVSLDKCDFYSENESSEHLQLKAALYHAVSRTEQ
VVVEKVLPDLHQVADLFVNDNLALEVQCSRLSEQRLFQRTKAYQSHGIQVLWLLGEKLWLGNRLSPLQRHFLYFSQNMGF
HLWELDVTKQLIRLHYLIYEDLHGKIHYLTKTCSFSDDIMAFFRLPYRQQKLSTYEVNQDQTLLTYIQKQLSSRHSIWLK
RQEEAYLQGKNLLSLPLSAYFPQVRPFDFAEGFCQISQDLSPFYENFHCFYQNQTEKERQWLYPPAYYDKMVNKPQKGEC
DVR
Nucleotide
Download Length: 972 bp
>NTDB_id=33605 SGGBAA2069_RS03440 WP_009853776.1 650022..650993(+) (coiA) [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
GTGTTATCAGCGCTTGATGAAAACGGAAAATTAGTGTCTTTGTTAGACGCTATCCCAGCCAACCAAAATTTTGTTTGCCC
AGCTTGCCACTCTGCTGTGCGTTTAAAAAATGGCAAAGTTATGCGTCCGCACTTTGCTCATGTTTCTTTGGATAAGTGTG
ATTTTTATAGTGAAAATGAAAGCAGTGAGCATCTTCAGTTAAAAGCGGCGCTTTATCATGCTGTGTCGCGGACTGAACAA
GTCGTGGTTGAAAAAGTTTTACCAGATTTACATCAGGTGGCTGATTTATTTGTCAATGATAATTTGGCTTTAGAAGTGCA
ATGTTCGCGCTTATCAGAACAGCGATTATTTCAACGCACAAAAGCCTATCAAAGTCATGGTATTCAAGTGCTTTGGTTGT
TGGGTGAAAAGTTGTGGCTCGGCAATCGTTTATCACCTTTGCAACGTCATTTTCTTTATTTTTCGCAGAATATGGGCTTT
CATTTGTGGGAGTTGGATGTCACAAAACAGCTCATTCGTTTACATTATTTAATCTACGAAGATTTGCATGGCAAGATTCA
CTATCTAACCAAGACTTGTTCATTTTCAGATGATATTATGGCATTTTTTCGACTTCCTTATCGGCAGCAGAAGCTTTCAA
CTTACGAGGTAAACCAAGACCAAACCTTATTAACTTATATTCAAAAACAGCTATCTTCTCGCCATTCAATTTGGTTAAAA
AGGCAAGAAGAAGCTTATTTGCAAGGGAAAAATTTGCTAAGTTTGCCTTTATCAGCTTATTTTCCACAAGTTCGTCCTTT
TGATTTTGCTGAGGGGTTCTGTCAGATTTCCCAAGATTTATCACCGTTTTACGAAAATTTTCATTGCTTTTATCAAAATC
AAACAGAAAAAGAACGTCAATGGCTTTATCCGCCAGCTTATTATGATAAAATGGTAAATAAACCTCAAAAAGGAGAATGT
GATGTCAGATAA
GTGTTATCAGCGCTTGATGAAAACGGAAAATTAGTGTCTTTGTTAGACGCTATCCCAGCCAACCAAAATTTTGTTTGCCC
AGCTTGCCACTCTGCTGTGCGTTTAAAAAATGGCAAAGTTATGCGTCCGCACTTTGCTCATGTTTCTTTGGATAAGTGTG
ATTTTTATAGTGAAAATGAAAGCAGTGAGCATCTTCAGTTAAAAGCGGCGCTTTATCATGCTGTGTCGCGGACTGAACAA
GTCGTGGTTGAAAAAGTTTTACCAGATTTACATCAGGTGGCTGATTTATTTGTCAATGATAATTTGGCTTTAGAAGTGCA
ATGTTCGCGCTTATCAGAACAGCGATTATTTCAACGCACAAAAGCCTATCAAAGTCATGGTATTCAAGTGCTTTGGTTGT
TGGGTGAAAAGTTGTGGCTCGGCAATCGTTTATCACCTTTGCAACGTCATTTTCTTTATTTTTCGCAGAATATGGGCTTT
CATTTGTGGGAGTTGGATGTCACAAAACAGCTCATTCGTTTACATTATTTAATCTACGAAGATTTGCATGGCAAGATTCA
CTATCTAACCAAGACTTGTTCATTTTCAGATGATATTATGGCATTTTTTCGACTTCCTTATCGGCAGCAGAAGCTTTCAA
CTTACGAGGTAAACCAAGACCAAACCTTATTAACTTATATTCAAAAACAGCTATCTTCTCGCCATTCAATTTGGTTAAAA
AGGCAAGAAGAAGCTTATTTGCAAGGGAAAAATTTGCTAAGTTTGCCTTTATCAGCTTATTTTCCACAAGTTCGTCCTTT
TGATTTTGCTGAGGGGTTCTGTCAGATTTCCCAAGATTTATCACCGTTTTACGAAAATTTTCATTGCTTTTATCAAAATC
AAACAGAAAAAGAACGTCAATGGCTTTATCCGCCAGCTTATTATGATAAAATGGTAAATAAACCTCAAAAAGGAGAATGT
GATGTCAGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Streptococcus mitis NCTC 12261 |
48.875 |
96.285 |
0.471 |
| coiA | Streptococcus pneumoniae Rx1 |
47.91 |
96.285 |
0.461 |
| coiA | Streptococcus pneumoniae D39 |
47.91 |
96.285 |
0.461 |
| coiA | Streptococcus pneumoniae R6 |
47.91 |
96.285 |
0.461 |
| coiA | Streptococcus pneumoniae TIGR4 |
47.91 |
96.285 |
0.461 |
| coiA | Lactococcus lactis subsp. cremoris KW2 |
40.923 |
100 |
0.412 |