Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EO213_RS19375 | Genome accession | NZ_CP035091 |
| Coordinates | 942490..943002 (-) | Length | 170 a.a. |
| NCBI ID | WP_011750041.1 | Uniprot ID | A1B8M8 |
| Organism | Paracoccus denitrificans strain ATCC 19367 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 937490..948002
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO213_RS19350 (EO213_19350) | - | 937610..938554 (+) | 945 | WP_011750036.1 | ABC transporter permease | - |
| EO213_RS19355 (EO213_19355) | - | 938551..939414 (+) | 864 | WP_011750037.1 | ABC transporter permease | - |
| EO213_RS19360 (EO213_19360) | - | 939414..941084 (+) | 1671 | WP_011750038.1 | ABC transporter ATP-binding protein | - |
| EO213_RS19365 (EO213_19365) | - | 941081..941941 (+) | 861 | WP_011750039.1 | carbon-nitrogen hydrolase family protein | - |
| EO213_RS19370 (EO213_19370) | - | 941954..942493 (+) | 540 | WP_011750040.1 | carboxymuconolactone decarboxylase family protein | - |
| EO213_RS19375 (EO213_19375) | ssb | 942490..943002 (-) | 513 | WP_011750041.1 | single-stranded DNA-binding protein | Machinery gene |
| EO213_RS19380 (EO213_19380) | - | 943235..943882 (+) | 648 | WP_011750042.1 | lytic transglycosylase domain-containing protein | - |
| EO213_RS19385 (EO213_19385) | - | 943945..944514 (-) | 570 | WP_041530412.1 | YSC84-related protein | - |
| EO213_RS19390 (EO213_19390) | hemB | 944588..945586 (-) | 999 | WP_041530413.1 | porphobilinogen synthase | - |
| EO213_RS19395 (EO213_19395) | - | 945738..946304 (+) | 567 | WP_041530414.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18166.72 Da Isoelectric Point: 6.4874
>NTDB_id=334358 EO213_RS19375 WP_011750041.1 942490..943002(-) (ssb) [Paracoccus denitrificans strain ATCC 19367]
MAGSVNKVILVGNLGQDPEVRSFQNGGKVANLRIATSEQWKDRNTGERRERTEWHTVVIYSEPLVRVAEQFLKKGSKVYV
EGQLETRKWQDQSGNDRYSTEVALRPFRSELHMLDSRGGAGGGGGRDEGYGGGSYGGGSSGGSSSGGGYSSGGGGGQSQS
RPDFDDDIPF
MAGSVNKVILVGNLGQDPEVRSFQNGGKVANLRIATSEQWKDRNTGERRERTEWHTVVIYSEPLVRVAEQFLKKGSKVYV
EGQLETRKWQDQSGNDRYSTEVALRPFRSELHMLDSRGGAGGGGGRDEGYGGGSYGGGSSGGSSSGGGYSSGGGGGQSQS
RPDFDDDIPF
Nucleotide
Download Length: 513 bp
>NTDB_id=334358 EO213_RS19375 WP_011750041.1 942490..943002(-) (ssb) [Paracoccus denitrificans strain ATCC 19367]
ATGGCAGGCAGCGTGAACAAGGTGATCCTGGTCGGCAACCTGGGCCAAGACCCGGAGGTCCGCAGCTTCCAGAACGGCGG
CAAGGTCGCCAACCTGCGGATCGCCACCAGCGAGCAGTGGAAGGACCGCAACACCGGCGAGCGTCGCGAGCGCACGGAAT
GGCACACGGTGGTCATCTATTCCGAACCGCTGGTCCGCGTGGCCGAGCAATTCCTGAAAAAGGGCTCCAAGGTCTATGTC
GAAGGCCAGCTGGAAACCCGCAAATGGCAGGATCAGAGCGGCAACGACCGCTATTCGACCGAGGTCGCGCTGCGCCCCTT
CCGCAGCGAGTTGCATATGCTCGACAGCCGCGGCGGCGCGGGCGGCGGCGGCGGCCGCGATGAAGGCTATGGCGGCGGCA
GTTACGGCGGTGGCTCTTCCGGCGGCAGCTCGTCCGGGGGCGGATATTCCTCGGGCGGCGGTGGCGGCCAGTCGCAGAGC
CGCCCCGATTTCGACGACGACATCCCGTTCTAA
ATGGCAGGCAGCGTGAACAAGGTGATCCTGGTCGGCAACCTGGGCCAAGACCCGGAGGTCCGCAGCTTCCAGAACGGCGG
CAAGGTCGCCAACCTGCGGATCGCCACCAGCGAGCAGTGGAAGGACCGCAACACCGGCGAGCGTCGCGAGCGCACGGAAT
GGCACACGGTGGTCATCTATTCCGAACCGCTGGTCCGCGTGGCCGAGCAATTCCTGAAAAAGGGCTCCAAGGTCTATGTC
GAAGGCCAGCTGGAAACCCGCAAATGGCAGGATCAGAGCGGCAACGACCGCTATTCGACCGAGGTCGCGCTGCGCCCCTT
CCGCAGCGAGTTGCATATGCTCGACAGCCGCGGCGGCGCGGGCGGCGGCGGCGGCCGCGATGAAGGCTATGGCGGCGGCA
GTTACGGCGGTGGCTCTTCCGGCGGCAGCTCGTCCGGGGGCGGATATTCCTCGGGCGGCGGTGGCGGCCAGTCGCAGAGC
CGCCCCGATTTCGACGACGACATCCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
50.568 |
100 |
0.524 |
| ssb | Glaesserella parasuis strain SC1401 |
47.849 |
100 |
0.524 |
| ssb | Neisseria gonorrhoeae MS11 |
39.665 |
100 |
0.418 |
| ssb | Neisseria meningitidis MC58 |
39.106 |
100 |
0.412 |