Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EMO94_RS12290 Genome accession   NZ_CP035005
Coordinates   2407982..2408647 (+) Length   221 a.a.
NCBI ID   WP_000697873.1    Uniprot ID   -
Organism   Staphylococcus aureus strain PCFH-226     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2402982..2413647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EMO94_RS12265 - 2404391..2405152 (+) 762 WP_000323448.1 alpha/beta hydrolase family protein -
  EMO94_RS12270 - 2405396..2405851 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  EMO94_RS14685 - 2405973..2406074 (+) 102 WP_000731972.1 SE2200 family small protein -
  EMO94_RS12280 - 2406134..2407558 (-) 1425 WP_031796859.1 alkaline phosphatase -
  EMO94_RS12285 - 2407756..2407956 (+) 201 WP_000604731.1 hypothetical protein -
  EMO94_RS12290 braR 2407982..2408647 (+) 666 WP_000697873.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  EMO94_RS12295 braS 2408658..2409545 (+) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  EMO94_RS12300 - 2409653..2410408 (+) 756 WP_042743028.1 ABC transporter ATP-binding protein -
  EMO94_RS12305 - 2410405..2412405 (+) 2001 WP_000776741.1 ABC transporter permease -
  EMO94_RS12310 - 2412574..2413521 (+) 948 WP_014532515.1 IS30-like element ISSau1 family transposase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25434.46 Da        Isoelectric Point: 4.6079

>NTDB_id=333952 EMO94_RS12290 WP_000697873.1 2407982..2408647(+) (braR) [Staphylococcus aureus strain PCFH-226]
MKILIVEDDFVIAESLASELEKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=333952 EMO94_RS12290 WP_000697873.1 2407982..2408647(+) (braR) [Staphylococcus aureus strain PCFH-226]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTGAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACTCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment