Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FRD49_RS01040 | Genome accession | NZ_CP042994 |
| Coordinates | 226192..226773 (+) | Length | 193 a.a. |
| NCBI ID | WP_002059460.1 | Uniprot ID | - |
| Organism | Acinetobacter nosocomialis strain J1A | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 221192..231773
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FRD49_RS19025 | - | 221521..223587 (+) | 2067 | WP_060513734.1 | motility associated factor glycosyltransferase family protein | - |
| FRD49_RS01030 (FRD49_01030) | - | 223600..225387 (+) | 1788 | WP_148356562.1 | site-specific integrase | - |
| FRD49_RS01035 (FRD49_01035) | - | 225515..226120 (+) | 606 | WP_228267782.1 | hypothetical protein | - |
| FRD49_RS01040 (FRD49_01040) | ssb | 226192..226773 (+) | 582 | WP_002059460.1 | single-stranded DNA-binding protein | Machinery gene |
| FRD49_RS01045 (FRD49_01045) | - | 226897..228116 (+) | 1220 | WP_125512201.1 | IS3 family transposase | - |
| FRD49_RS01050 (FRD49_01050) | - | 228122..228354 (+) | 233 | Protein_199 | helix-turn-helix domain-containing protein | - |
| FRD49_RS01055 (FRD49_01055) | - | 228384..231098 (+) | 2715 | WP_060513780.1 | TrlF family AAA-like ATPase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21262.04 Da Isoelectric Point: 6.4841
>NTDB_id=333946 FRD49_RS01040 WP_002059460.1 226192..226773(+) (ssb) [Acinetobacter nosocomialis strain J1A]
MARGSVNKVILIGSLGKDPETKSFPNGGSLTQFSIATSESWVDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYI
EGSLRTRQWTDQNGQERYTTEIRGEQMQMLDSARQQGEQGQGGGEFNQPRFNNNQGGYNNNQNQGGYGNQGGYGNNQPAQ
GNSYGNNNPGGFAPKQQPAPTPAPADLDDDLPF
MARGSVNKVILIGSLGKDPETKSFPNGGSLTQFSIATSESWVDKNTGERKEQTEWHRIVLHNRLGEIAQQFLRKGSKVYI
EGSLRTRQWTDQNGQERYTTEIRGEQMQMLDSARQQGEQGQGGGEFNQPRFNNNQGGYNNNQNQGGYGNQGGYGNNQPAQ
GNSYGNNNPGGFAPKQQPAPTPAPADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=333946 FRD49_RS01040 WP_002059460.1 226192..226773(+) (ssb) [Acinetobacter nosocomialis strain J1A]
ATGGCTAGAGGTTCGGTTAACAAGGTCATTCTGATTGGCAGTTTAGGAAAAGACCCTGAGACCAAAAGTTTCCCAAATGG
TGGTTCACTTACACAGTTTTCAATAGCTACTAGTGAGTCTTGGGTAGATAAAAATACTGGCGAGCGTAAAGAACAAACGG
AATGGCATCGTATTGTGTTGCACAACCGTTTAGGCGAAATCGCTCAGCAATTTTTACGTAAAGGTTCTAAAGTTTACATT
GAGGGATCATTGCGTACCCGTCAATGGACGGATCAAAATGGTCAAGAGCGTTACACTACAGAAATTCGTGGCGAACAAAT
GCAAATGCTAGATTCAGCTCGTCAACAAGGTGAGCAAGGTCAAGGTGGTGGTGAATTTAATCAACCACGTTTTAACAACA
ATCAAGGTGGTTATAATAATAACCAAAACCAAGGCGGCTACGGCAACCAAGGTGGTTATGGTAATAATCAACCGGCTCAA
GGCAATAGCTACGGCAACAATAACCCGGGTGGTTTTGCGCCGAAACAACAGCCTGCACCGACACCAGCACCAGCAGACTT
AGATGACGATCTACCGTTCTAA
ATGGCTAGAGGTTCGGTTAACAAGGTCATTCTGATTGGCAGTTTAGGAAAAGACCCTGAGACCAAAAGTTTCCCAAATGG
TGGTTCACTTACACAGTTTTCAATAGCTACTAGTGAGTCTTGGGTAGATAAAAATACTGGCGAGCGTAAAGAACAAACGG
AATGGCATCGTATTGTGTTGCACAACCGTTTAGGCGAAATCGCTCAGCAATTTTTACGTAAAGGTTCTAAAGTTTACATT
GAGGGATCATTGCGTACCCGTCAATGGACGGATCAAAATGGTCAAGAGCGTTACACTACAGAAATTCGTGGCGAACAAAT
GCAAATGCTAGATTCAGCTCGTCAACAAGGTGAGCAAGGTCAAGGTGGTGGTGAATTTAATCAACCACGTTTTAACAACA
ATCAAGGTGGTTATAATAATAACCAAAACCAAGGCGGCTACGGCAACCAAGGTGGTTATGGTAATAATCAACCGGCTCAA
GGCAATAGCTACGGCAACAATAACCCGGGTGGTTTTGCGCCGAAACAACAGCCTGCACCGACACCAGCACCAGCAGACTT
AGATGACGATCTACCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
52.308 |
100 |
0.529 |
| ssb | Vibrio cholerae strain A1552 |
46.5 |
100 |
0.482 |
| ssb | Neisseria meningitidis MC58 |
39.901 |
100 |
0.42 |
| ssb | Neisseria gonorrhoeae MS11 |
39.901 |
100 |
0.42 |