Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SP70585_RS11765 Genome accession   NC_012468
Coordinates   2183908..2184666 (+) Length   252 a.a.
NCBI ID   WP_000410384.1    Uniprot ID   C1CBL7
Organism   Streptococcus pneumoniae 70585     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2178908..2189666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SP70585_RS11735 (SP70585_2364) comE 2179504..2180256 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  SP70585_RS11740 (SP70585_2365) comD/comD1 2180253..2181578 (-) 1326 WP_015898772.1 competence system sensor histidine kinase ComD Regulator
  SP70585_RS11745 (SP70585_2366) comC/comC1 2181599..2181724 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  SP70585_RS11755 (SP70585_2368) rlmH 2182007..2182486 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SP70585_RS11760 (SP70585_2369) htrA 2182669..2183850 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  SP70585_RS11765 (SP70585_2370) spo0J 2183908..2184666 (+) 759 WP_000410384.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29183.53 Da        Isoelectric Point: 9.0667

>NTDB_id=33357 SP70585_RS11765 WP_000410384.1 2183908..2184666(+) (spo0J) [Streptococcus pneumoniae 70585]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHTEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=33357 SP70585_RS11765 WP_000410384.1 2183908..2184666(+) (spo0J) [Streptococcus pneumoniae 70585]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCGATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATACTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB C1CBL7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508


Multiple sequence alignment