Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | D9V62_RS02790 | Genome accession | NZ_CP034894 |
| Coordinates | 575286..575795 (-) | Length | 169 a.a. |
| NCBI ID | WP_158340275.1 | Uniprot ID | A0A4D6XQY1 |
| Organism | Buchnera aphidicola (Aphis helianthi) strain Ahe | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 570286..580795
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V62_RS02770 (D9V62_02760) | - | 570922..572508 (-) | 1587 | WP_158340271.1 | peptide chain release factor 3 | - |
| D9V62_RS02775 (D9V62_02765) | ansA | 572725..573732 (+) | 1008 | WP_261979523.1 | asparaginase | - |
| D9V62_RS02780 (D9V62_02770) | - | 573748..574323 (-) | 576 | WP_158340273.1 | NfuA family Fe-S biogenesis protein | - |
| D9V62_RS02785 (D9V62_02775) | bioH | 574447..575223 (+) | 777 | WP_158340274.1 | pimeloyl-ACP methyl ester esterase BioH | - |
| D9V62_RS02790 (D9V62_02780) | ssb | 575286..575795 (-) | 510 | WP_158340275.1 | single-stranded DNA-binding protein | Machinery gene |
| D9V62_RS02795 (D9V62_02785) | dnaB | 576563..577960 (+) | 1398 | WP_158340276.1 | replicative DNA helicase | - |
| D9V62_RS02800 (D9V62_02790) | gshB | 578075..579037 (+) | 963 | WP_158340277.1 | glutathione synthase | - |
| D9V62_RS02805 (D9V62_02795) | ruvX | 579048..579464 (+) | 417 | WP_158340349.1 | Holliday junction resolvase RuvX | - |
| D9V62_RS02810 (D9V62_02800) | - | 579484..580161 (+) | 678 | WP_158340278.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
Sequence
Protein
Download Length: 169 a.a. Molecular weight: 19271.69 Da Isoelectric Point: 6.7376
>NTDB_id=333397 D9V62_RS02790 WP_158340275.1 575286..575795(-) (ssb) [Buchnera aphidicola (Aphis helianthi) strain Ahe]
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRVVLFGKLAEIAGEYLRKGSQIYI
EGSLQTRKWQDQNGFERYTTEVIVNIGGTMQMLGNRNSNSHNLSASENNTILKTKKIETIATSKNKEKYKLKKEDIDSEE
MDFDDEIPF
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRVVLFGKLAEIAGEYLRKGSQIYI
EGSLQTRKWQDQNGFERYTTEVIVNIGGTMQMLGNRNSNSHNLSASENNTILKTKKIETIATSKNKEKYKLKKEDIDSEE
MDFDDEIPF
Nucleotide
Download Length: 510 bp
>NTDB_id=333397 D9V62_RS02790 WP_158340275.1 575286..575795(-) (ssb) [Buchnera aphidicola (Aphis helianthi) strain Ahe]
ATGGCAAGTAGAGGTGTAAATAAAGTAATTTTAATTGGTCATTTAGGTCAAGATCCAGAAGTACGATACATGCCAAATGG
TAATGCAGTAGTAAATATGACGCTTGCAACTTCAGAAAATTGGAAAGATAAAAATACAGGTGAAAATAAAGAAAAAACGG
AATGGCATAGAGTAGTTTTATTTGGAAAATTAGCAGAAATAGCTGGAGAATATTTGCGAAAAGGCTCTCAAATATATATT
GAAGGATCACTTCAAACAAGAAAGTGGCAAGACCAAAATGGTTTTGAACGATATACAACAGAAGTAATAGTAAATATCGG
TGGAACAATGCAAATGCTAGGAAATCGAAATTCTAATTCTCATAATCTTTCTGCAAGTGAAAACAACACTATTTTAAAAA
CAAAAAAAATAGAAACTATTGCTACATCTAAAAACAAAGAAAAATATAAACTAAAAAAAGAAGACATAGATTCTGAAGAA
ATGGATTTTGATGATGAAATTCCATTTTAA
ATGGCAAGTAGAGGTGTAAATAAAGTAATTTTAATTGGTCATTTAGGTCAAGATCCAGAAGTACGATACATGCCAAATGG
TAATGCAGTAGTAAATATGACGCTTGCAACTTCAGAAAATTGGAAAGATAAAAATACAGGTGAAAATAAAGAAAAAACGG
AATGGCATAGAGTAGTTTTATTTGGAAAATTAGCAGAAATAGCTGGAGAATATTTGCGAAAAGGCTCTCAAATATATATT
GAAGGATCACTTCAAACAAGAAAGTGGCAAGACCAAAATGGTTTTGAACGATATACAACAGAAGTAATAGTAAATATCGG
TGGAACAATGCAAATGCTAGGAAATCGAAATTCTAATTCTCATAATCTTTCTGCAAGTGAAAACAACACTATTTTAAAAA
CAAAAAAAATAGAAACTATTGCTACATCTAAAAACAAAGAAAAATATAAACTAAAAAAAGAAGACATAGATTCTGAAGAA
ATGGATTTTGATGATGAAATTCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
57.062 |
100 |
0.598 |
| ssb | Glaesserella parasuis strain SC1401 |
46.409 |
100 |
0.497 |
| ssb | Neisseria meningitidis MC58 |
42.614 |
100 |
0.444 |
| ssb | Neisseria gonorrhoeae MS11 |
42.614 |
100 |
0.444 |