Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | D9V69_RS02730 | Genome accession | NZ_CP034873 |
| Coordinates | 574871..575386 (-) | Length | 171 a.a. |
| NCBI ID | WP_158356786.1 | Uniprot ID | A0A4D6Y669 |
| Organism | Buchnera aphidicola (Hyadaphis tataricae) strain Hta | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 569871..580386
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9V69_RS02715 (D9V69_02710) | - | 570704..572305 (-) | 1602 | WP_158356783.1 | peptide chain release factor 3 | - |
| D9V69_RS02720 (D9V69_02715) | - | 573308..573886 (-) | 579 | WP_158356784.1 | NfuA family Fe-S biogenesis protein | - |
| D9V69_RS02725 (D9V69_02720) | bioH | 574031..574807 (+) | 777 | WP_158356785.1 | pimeloyl-ACP methyl ester esterase BioH | - |
| D9V69_RS02730 (D9V69_02725) | ssb | 574871..575386 (-) | 516 | WP_158356786.1 | single-stranded DNA-binding protein | Machinery gene |
| D9V69_RS02735 (D9V69_02730) | dnaB | 575884..577281 (+) | 1398 | WP_158356787.1 | replicative DNA helicase | - |
| D9V69_RS02740 (D9V69_02735) | gshB | 577563..578537 (+) | 975 | WP_158356788.1 | glutathione synthase | - |
| D9V69_RS02745 (D9V69_02740) | ruvX | 578534..578944 (+) | 411 | WP_158356789.1 | Holliday junction resolvase RuvX | - |
| D9V69_RS02750 (D9V69_02745) | - | 578973..579668 (+) | 696 | WP_158356790.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19429.70 Da Isoelectric Point: 5.3813
>NTDB_id=333389 D9V69_RS02730 WP_158356786.1 574871..575386(-) (ssb) [Buchnera aphidicola (Hyadaphis tataricae) strain Hta]
MASRGVNKVILVGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKSTGENKEKTEWHRVVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGFERYTTEVIVNIGGTMQMLGSRSSNVQATAINNNKNNFSKDKNTEKVDLEEKNPEKYKLNKDSLNP
EEIDFDDEIPF
MASRGVNKVILVGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKSTGENKEKTEWHRVVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGFERYTTEVIVNIGGTMQMLGSRSSNVQATAINNNKNNFSKDKNTEKVDLEEKNPEKYKLNKDSLNP
EEIDFDDEIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=333389 D9V69_RS02730 WP_158356786.1 574871..575386(-) (ssb) [Buchnera aphidicola (Hyadaphis tataricae) strain Hta]
ATGGCAAGTAGAGGTGTAAATAAAGTAATTCTTGTAGGTCATTTAGGTCAAGATCCTGAGGTGCGTTATATGCCTAATGG
TAATGCAGTAGTGAATATGACATTAGCCACTTCAGAAAATTGGAAGGATAAGAGTACTGGAGAAAATAAAGAAAAAACAG
AATGGCATCGAGTAGTATTATTTGGTAAATTAGCAGAAATTGCTGGCGAATATTTGAGAAAGGGTTCGCAAGTGTATATT
GAAGGTTCCTTGCAAACTAGAAAATGGCAAGATCAAAATGGTTTTGAACGATATACTACAGAGGTTATTGTGAATATTGG
TGGAACTATGCAAATGTTAGGAAGTAGAAGTTCTAATGTTCAAGCTACTGCTATCAATAACAACAAAAATAATTTTTCTA
AAGACAAAAATACTGAAAAAGTTGATTTAGAAGAAAAGAATCCAGAAAAATATAAATTAAATAAAGATTCTTTGAATCCT
GAAGAAATTGATTTTGATGATGAAATACCTTTTTAA
ATGGCAAGTAGAGGTGTAAATAAAGTAATTCTTGTAGGTCATTTAGGTCAAGATCCTGAGGTGCGTTATATGCCTAATGG
TAATGCAGTAGTGAATATGACATTAGCCACTTCAGAAAATTGGAAGGATAAGAGTACTGGAGAAAATAAAGAAAAAACAG
AATGGCATCGAGTAGTATTATTTGGTAAATTAGCAGAAATTGCTGGCGAATATTTGAGAAAGGGTTCGCAAGTGTATATT
GAAGGTTCCTTGCAAACTAGAAAATGGCAAGATCAAAATGGTTTTGAACGATATACTACAGAGGTTATTGTGAATATTGG
TGGAACTATGCAAATGTTAGGAAGTAGAAGTTCTAATGTTCAAGCTACTGCTATCAATAACAACAAAAATAATTTTTCTA
AAGACAAAAATACTGAAAAAGTTGATTTAGAAGAAAAGAATCCAGAAAAATATAAATTAAATAAAGATTCTTTGAATCCT
GAAGAAATTGATTTTGATGATGAAATACCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
57.542 |
100 |
0.602 |
| ssb | Glaesserella parasuis strain SC1401 |
48.619 |
100 |
0.515 |
| ssb | Neisseria meningitidis MC58 |
40.341 |
100 |
0.415 |
| ssb | Neisseria gonorrhoeae MS11 |
40.341 |
100 |
0.415 |