Detailed information NTG0333338

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: FWK43_RS02100
• Genome accession: NZ_CP042983
• Coordinates: 454916..456022 (+)
• Length: 368 a.a.
• NCBI ID: WP_132994706.1
• Uniprot ID: -
• Organism: Histophilus somni strain UOC-KLM-ATR-01
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 449916..461022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FWK43_RS02080 (FWK43_02080)	proA	450905..452161 (-)	1257	WP_132994709.1	glutamate-5-semialdehyde dehydrogenase	-
FWK43_RS02085 (FWK43_02085)	-	452171..452842 (-)	672	WP_132994708.1	trimeric intracellular cation channel family protein	-
FWK43_RS02090 (FWK43_02090)	-	453003..453590 (-)	588	WP_011608566.1	thymidine kinase	-
FWK43_RS02095 (FWK43_02095)	tsaD	453652..454680 (-)	1029	WP_132994707.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
FWK43_RS02100 (FWK43_02100)	dprA	454916..456022 (+)	1107	WP_132994706.1	DNA-processing protein DprA	Machinery gene
FWK43_RS02105 (FWK43_02105)	rsmD	456005..456607 (-)	603	WP_012341564.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FWK43_RS02110 (FWK43_02110)	pilA	456671..458014 (+)	1344	WP_132994705.1	signal recognition particle-docking protein FtsY	Machinery gene
FWK43_RS02115 (FWK43_02115)	murJ	458176..459747 (-)	1572	WP_132994704.1	murein biosynthesis integral membrane protein MurJ	-
FWK43_RS02120 (FWK43_02120)	rpsT	460025..460288 (+)	264	WP_011608572.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41535.78 Da
• Isoelectric Point: 6.5011

>NTDB_id=333338 FWK43_RS02100 WP_132994706.1 454916..456022(+) (dprA) [Histophilus somni strain UOC-KLM-ATR-01]
MDKRNELLLRLLQVPKLGASGITQLLSHIDLKTLEDYDDVAFHYLGWKPEQVNRWLYPDLRYIEPALFWASKKGHYLMNF
YQENYPYLLKQTIGAPPLLFIKGNPEILAQQQVAIVGSRHCSHYGEYWAKYFATELFLAGFVITSGLALGIDGFCHQAVV
DIQGQTIGVLGGGLEELYPKQHKKLAQQMLDYGGALVSEFLPHQPPKPQHFPQRNRIISGLSKGVLVVEATEKSGSLITA
RYALEQNREVFALPGQIQNEYSQGCHRLIKDGALLVENVADIVENLSPFMHYERQLTAKQIETQFPPAYKLPASPTYPEL
YAHIGYTPVGLDELSNKSGLSVDTLLIQLLELELQDLVIAEKGLYRRT

Nucleotide

• Length: 1107 bp

>NTDB_id=333338 FWK43_RS02100 WP_132994706.1 454916..456022(+) (dprA) [Histophilus somni strain UOC-KLM-ATR-01]
ATGGATAAACGGAATGAGTTGTTACTGCGTTTGTTACAAGTGCCGAAGTTGGGAGCGTCCGGAATAACTCAACTTTTATC
ACACATCGATTTAAAAACATTAGAGGATTATGATGATGTTGCGTTTCATTATTTAGGCTGGAAACCTGAACAGGTAAATA
GATGGTTGTATCCGGATCTTAGATATATTGAACCTGCATTATTTTGGGCAAGCAAAAAGGGACATTATTTGATGAATTTC
TATCAAGAGAATTACCCTTATTTATTAAAGCAAACCATAGGTGCTCCCCCTTTGTTATTTATCAAAGGCAATCCGGAAAT
ACTTGCTCAACAACAAGTCGCTATTGTAGGAAGCCGTCATTGCTCACATTATGGCGAGTATTGGGCAAAGTATTTTGCAA
CGGAATTGTTCCTTGCCGGTTTTGTTATTACCAGTGGACTGGCTTTAGGGATAGACGGTTTTTGTCATCAGGCTGTTGTG
GATATTCAAGGACAAACTATCGGGGTATTAGGGGGAGGTTTGGAAGAGTTGTATCCCAAACAACATAAAAAATTAGCACA
ACAAATGCTAGATTATGGCGGTGCGTTAGTGTCAGAATTTTTACCTCATCAGCCTCCCAAACCACAACATTTTCCTCAAC
GTAATCGCATTATTAGCGGACTTTCTAAAGGTGTTTTAGTGGTTGAGGCAACAGAAAAAAGCGGTTCACTCATTACTGCA
CGTTATGCTTTAGAACAAAATAGAGAAGTTTTTGCACTTCCGGGGCAAATTCAAAATGAGTATAGTCAAGGGTGTCATAG
ATTAATAAAAGACGGTGCATTGTTAGTAGAGAATGTTGCAGATATTGTAGAAAATTTATCGCCTTTTATGCATTATGAAC
GTCAACTAACAGCAAAACAGATAGAAACGCAATTTCCGCCGGCTTATAAGTTACCTGCTTCACCGACTTATCCTGAACTC
TATGCCCATATTGGATATACGCCGGTAGGGCTTGATGAATTATCAAATAAAAGCGGATTAAGTGTAGATACCTTATTGAT
ACAGCTGTTAGAACTTGAATTGCAAGATCTCGTTATTGCTGAAAAAGGGTTATATCGACGGACTTAA

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (310-361)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.858	100	0.617
dprA	Glaesserella parasuis strain SC1401	50.144	94.293	0.473
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	45.278	97.826	0.443
dprA	Vibrio cholerae strain A1552	45.278	97.826	0.443
dprA	Vibrio campbellii strain DS40M4	41.096	99.185	0.408